2013-04-18 16:58:25
Full thread dump Java HotSpot(TM) 64-Bit Server VM (20.45-b01-451 mixed mode):

"Attach Listener" daemon prio=9 tid=7fcccb188800 nid=0x11bceb000 waiting on condition [00000000]
   java.lang.Thread.State: RUNNABLE

"Java2D Disposer" daemon prio=10 tid=7fccc8718800 nid=0x115e5a000 in Object.wait() [115e59000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e00fcf10> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118)
	- locked <7e00fcf10> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134)
	at sun.java2d.Disposer.run(Disposer.java:127)
	at java.lang.Thread.run(Thread.java:680)

"Timer-0" daemon prio=5 tid=7fcccf1ef000 nid=0x11700c000 in Object.wait() [11700b000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7dfe05ec0> (a java.util.TaskQueue)
	at java.lang.Object.wait(Object.java:485)
	at java.util.TimerThread.mainLoop(Timer.java:483)
	- locked <7dfe05ec0> (a java.util.TaskQueue)
	at java.util.TimerThread.run(Timer.java:462)

"pool-3-thread-5" prio=5 tid=7fccb6315800 nid=0x116405000 waiting on condition [116404000]
   java.lang.Thread.State: WAITING (parking)
	at sun.misc.Unsafe.park(Native Method)
	- parking to wait for  <7df890768> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject)
	at java.util.concurrent.locks.LockSupport.park(LockSupport.java:156)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1987)
	at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:399)
	at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:957)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:917)
	at java.lang.Thread.run(Thread.java:680)

"pool-3-thread-4" prio=5 tid=7fcccf057000 nid=0x11828e000 waiting on condition [11828d000]
   java.lang.Thread.State: WAITING (parking)
	at sun.misc.Unsafe.park(Native Method)
	- parking to wait for  <7df890768> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject)
	at java.util.concurrent.locks.LockSupport.park(LockSupport.java:156)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1987)
	at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:399)
	at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:957)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:917)
	at java.lang.Thread.run(Thread.java:680)

"pool-3-thread-3" prio=5 tid=7fccd08bd800 nid=0x11818b000 in Object.wait() [118189000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e2456e08> (a IceInternal.Outgoing)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.Outgoing.invoke(Outgoing.java:109)
	- locked <7e2456e08> (a IceInternal.Outgoing)
	at omero.api._IRenderingSettingsDelM.resetDefaultsInSet(_IRenderingSettingsDelM.java:721)
	at omero.api.IRenderingSettingsPrxHelper.resetDefaultsInSet(IRenderingSettingsPrxHelper.java:935)
	at omero.api.IRenderingSettingsPrxHelper.resetDefaultsInSet(IRenderingSettingsPrxHelper.java:907)
	at ome.formats.OMEROMetadataStoreClient.resetDefaultsAndGenerateThumbnails(OMEROMetadataStoreClient.java:2202)
	at ome.services.blitz.repo.ManagedImportRequestI.generateThumbnails(ManagedImportRequestI.java:451)
	at ome.services.blitz.repo.ManagedImportRequestI.step(ManagedImportRequestI.java:269)
	at omero.cmd.HandleI.steps(HandleI.java:435)
	at omero.cmd.HandleI$1.doWork(HandleI.java:365)
	at omero.cmd.HandleI$1.doWork(HandleI.java:361)
	at sun.reflect.GeneratedMethodAccessor254.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:518)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:111)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at com.sun.proxy.$Proxy65.doWork(Unknown Source)
	at ome.services.util.Executor$Impl.execute(Executor.java:416)
	at omero.cmd.HandleI.run(HandleI.java:359)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:439)
	at ome.services.util.Executor$Impl$1.call(Executor.java:447)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
	at java.lang.Thread.run(Thread.java:680)

"pool-3-thread-2" prio=5 tid=7fcccb887000 nid=0x1169b3000 waiting on condition [1169b2000]
   java.lang.Thread.State: WAITING (parking)
	at sun.misc.Unsafe.park(Native Method)
	- parking to wait for  <7df890768> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject)
	at java.util.concurrent.locks.LockSupport.park(LockSupport.java:156)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1987)
	at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:399)
	at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:957)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:917)
	at java.lang.Thread.run(Thread.java:680)

"Blitz-0-Ice.SelectorThread" prio=5 tid=7fccd084a000 nid=0x118088000 runnable [118087000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <7dfae20b8> (a sun.nio.ch.Util$2)
	- locked <7dfae20d0> (a java.util.Collections$UnmodifiableSet)
	- locked <7df9e14f8> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.SelectorThread.run(SelectorThread.java:120)
	at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273)

"Blitz-0-Ice.ThreadPool.Client-1" prio=5 tid=7fcccf070000 nid=0x117f85000 runnable [117f84000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <7dfae20e8> (a sun.nio.ch.Util$2)
	- locked <7dfae2100> (a java.util.Collections$UnmodifiableSet)
	- locked <7df9e1540> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Client-0" prio=5 tid=7fcccf06f000 nid=0x117e82000 in Object.wait() [117e81000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a05288> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a05288> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.EndpointHostResolverThread" prio=5 tid=7fccb62bb800 nid=0x117d7f000 in Object.wait() [117d7e000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7dfe82a78> (a IceInternal.EndpointHostResolver)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.EndpointHostResolver.run(EndpointHostResolver.java:77)
	- locked <7dfe82a78> (a IceInternal.EndpointHostResolver)
	at IceInternal.EndpointHostResolver$HelperThread.run(EndpointHostResolver.java:146)

"Blitz-0-Ice.ThreadPool.Server-9" prio=5 tid=7fccd0886800 nid=0x117c7c000 in Object.wait() [117c7b000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a052d8> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a052d8> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-8" prio=5 tid=7fccd0885800 nid=0x117b79000 in Object.wait() [117b78000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a052d8> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a052d8> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-7" prio=5 tid=7fccd0885000 nid=0x117a76000 in Object.wait() [117a75000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a052d8> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a052d8> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-6" prio=5 tid=7fccd0884000 nid=0x117973000 in Object.wait() [117972000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a052d8> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a052d8> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-5" prio=5 tid=7fccd0883800 nid=0x117870000 in Object.wait() [11786f000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a052d8> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a052d8> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-4" prio=5 tid=7fccd0882800 nid=0x11776d000 runnable [11776a000]
   java.lang.Thread.State: RUNNABLE
	at java.net.URL.<init>(URL.java:464)
	at java.net.URL.<init>(URL.java:413)
	at ome.scifio.io.Location.<init>(Location.java:108)
	at loci.common.Location.<init>(Location.java:71)
	at loci.common.Location.getAbsoluteFile(Location.java:340)
	at loci.formats.in.CellWorxReader.getTiffFiles(CellWorxReader.java:740)
	at loci.formats.in.CellWorxReader.initFile(CellWorxReader.java:325)
	at loci.formats.FormatReader.setId(FormatReader.java:1333)
	at loci.formats.ImageReader.setId(ImageReader.java:757)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:564)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:263)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:564)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:274)
	at ome.io.bioformats.BfPixelsWrapper.<init>(BfPixelsWrapper.java:50)
	at ome.io.bioformats.BfPixelBuffer.reader(BfPixelBuffer.java:73)
	at ome.io.bioformats.BfPixelBuffer.close(BfPixelBuffer.java:135)
	at omeis.providers.re.Renderer.close(Renderer.java:870)
	at ome.services.ThumbnailBean.resetMetadata(ThumbnailBean.java:679)
	at ome.services.ThumbnailBean.retrieveThumbnailSet(ThumbnailBean.java:920)
	at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:901)
	at sun.reflect.GeneratedMethodAccessor1192.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218)
	at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at com.sun.proxy.$Proxy91.getThumbnailByLongestSideSet(Unknown Source)
	at sun.reflect.GeneratedMethodAccessor1192.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at com.sun.proxy.$Proxy91.getThumbnailByLongestSideSet(Unknown Source)
	at sun.reflect.GeneratedMethodAccessor1213.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
	at ome.services.throttling.Callback.run(Callback.java:56)
	at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
	at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150)
	at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:87)
	at sun.reflect.GeneratedMethodAccessor1212.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at omero.cmd.CallContext.invoke(CallContext.java:59)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at com.sun.proxy.$Proxy92.getThumbnailByLongestSideSet_async(Unknown Source)
	at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:141)
	at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:361)
	at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:680)
	at IceInternal.Incoming.invoke(Incoming.java:159)
	at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
	at Ice.ConnectionI.message(ConnectionI.java:972)
	at IceInternal.ThreadPool.run(ThreadPool.java:577)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-3" prio=5 tid=7fccd0882000 nid=0x116e36000 runnable [116e32000]
   java.lang.Thread.State: RUNNABLE
	at java.net.URL.<init>(URL.java:464)
	at java.net.URL.<init>(URL.java:413)
	at ome.scifio.io.Location.<init>(Location.java:108)
	at ome.scifio.io.Location.<init>(Location.java:124)
	at loci.common.Location.<init>(Location.java:83)
	at loci.formats.in.CellWorxReader.getTiffFiles(CellWorxReader.java:746)
	at loci.formats.in.CellWorxReader.initFile(CellWorxReader.java:325)
	at loci.formats.FormatReader.setId(FormatReader.java:1333)
	at loci.formats.ImageReader.setId(ImageReader.java:757)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:564)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:263)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:564)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:274)
	at ome.io.bioformats.BfPixelsWrapper.<init>(BfPixelsWrapper.java:50)
	at ome.io.bioformats.BfPixelBuffer.reader(BfPixelBuffer.java:73)
	at ome.io.bioformats.BfPixelBuffer.setSeries(BfPixelBuffer.java:109)
	at ome.io.nio.PixelsService.createBfPixelBuffer(PixelsService.java:711)
	at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:481)
	at ome.logic.RenderingSettingsImpl.resetDefaults(RenderingSettingsImpl.java:500)
	at ome.logic.RenderingSettingsImpl.resetDefaultsInSet(RenderingSettingsImpl.java:629)
	at ome.logic.RenderingSettingsImpl.resetDefaultsInSet(RenderingSettingsImpl.java:1383)
	at sun.reflect.GeneratedMethodAccessor1135.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:111)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at com.sun.proxy.$Proxy93.resetDefaultsInSet(Unknown Source)
	at sun.reflect.GeneratedMethodAccessor1135.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at com.sun.proxy.$Proxy93.resetDefaultsInSet(Unknown Source)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
	at ome.services.throttling.Callback.run(Callback.java:56)
	at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
	at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150)
	at ome.services.blitz.impl.RenderingSettingsI.resetDefaultsInSet_async(RenderingSettingsI.java:140)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at omero.cmd.CallContext.invoke(CallContext.java:59)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at com.sun.proxy.$Proxy94.resetDefaultsInSet_async(Unknown Source)
	at omero.api._IRenderingSettingsTie.resetDefaultsInSet_async(_IRenderingSettingsTie.java:155)
	at omero.api._IRenderingSettingsDisp.___resetDefaultsInSet(_IRenderingSettingsDisp.java:411)
	at omero.api._IRenderingSettingsDisp.__dispatch(_IRenderingSettingsDisp.java:802)
	at IceInternal.Incoming.invoke(Incoming.java:159)
	at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
	at Ice.ConnectionI.message(ConnectionI.java:972)
	at IceInternal.ThreadPool.run(ThreadPool.java:577)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-2" prio=5 tid=7fccd0881000 nid=0x116d33000 in Object.wait() [116d32000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a052d8> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a052d8> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-1" prio=5 tid=7fccd0843800 nid=0x116c30000 runnable [116c2f000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <7dfae2118> (a sun.nio.ch.Util$2)
	- locked <7dfae2130> (a java.util.Collections$UnmodifiableSet)
	- locked <7df9e1588> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.ThreadPool.Server-0" prio=5 tid=7fccd087d000 nid=0x116b2d000 in Object.wait() [116b2c000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7e0a052d8> (a IceInternal.ThreadPool)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <7e0a052d8> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Blitz-0-Ice.Timer" prio=5 tid=7fccd0842800 nid=0x1168b0000 in Object.wait() [1168af000]
   java.lang.Thread.State: TIMED_WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7df901d68> (a IceInternal.Timer)
	at IceInternal.Timer.run(Timer.java:211)
	- locked <7df901d68> (a IceInternal.Timer)

"pool-3-thread-1" prio=5 tid=7fcccf072800 nid=0x116508000 waiting on condition [116507000]
   java.lang.Thread.State: WAITING (parking)
	at sun.misc.Unsafe.park(Native Method)
	- parking to wait for  <7df890768> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject)
	at java.util.concurrent.locks.LockSupport.park(LockSupport.java:156)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1987)
	at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:399)
	at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:957)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:917)
	at java.lang.Thread.run(Thread.java:680)

"AWT-AppKit" daemon prio=5 tid=7fcccb190800 nid=0x7fff780d8180 runnable [00000000]
   java.lang.Thread.State: RUNNABLE

"OMERO.scheduler_QuartzSchedulerThread" prio=5 tid=7fcccdefa000 nid=0x115d57000 waiting on condition [115d56000]
   java.lang.Thread.State: TIMED_WAITING (sleeping)
	at java.lang.Thread.sleep(Native Method)
	at org.quartz.core.QuartzSchedulerThread.run(QuartzSchedulerThread.java:394)

"bitronix-scheduler" daemon prio=5 tid=7fccce7f7000 nid=0x116302000 waiting on condition [116301000]
   java.lang.Thread.State: TIMED_WAITING (sleeping)
	at java.lang.Thread.sleep(Native Method)
	at bitronix.tm.timer.TaskScheduler.run(TaskScheduler.java:194)

"Ice.Timer" prio=5 tid=7fccc81a3800 nid=0x117136000 in Object.wait() [117135000]
   java.lang.Thread.State: TIMED_WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7dc019140> (a IceInternal.Timer)
	at IceInternal.Timer.run(Timer.java:211)
	- locked <7dc019140> (a IceInternal.Timer)

"net.sf.ehcache.CacheManager@5e8518d4" daemon prio=5 tid=7fccc8178800 nid=0x1160b0000 in Object.wait() [1160af000]
   java.lang.Thread.State: TIMED_WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7dc145448> (a java.util.TaskQueue)
	at java.util.TimerThread.mainLoop(Timer.java:509)
	- locked <7dc145448> (a java.util.TaskQueue)
	at java.util.TimerThread.run(Timer.java:462)

"perf4j-async-stats-appender-sink-CoalescingStatistics" daemon prio=5 tid=7fccc7806000 nid=0x115bf0000 waiting on condition [115bef000]
   java.lang.Thread.State: TIMED_WAITING (parking)
	at sun.misc.Unsafe.park(Native Method)
	- parking to wait for  <7dc002c38> (a java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject)
	at java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:196)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.awaitNanos(AbstractQueuedSynchronizer.java:2025)
	at java.util.concurrent.ArrayBlockingQueue.poll(ArrayBlockingQueue.java:347)
	at org.perf4j.helpers.GenericAsyncCoalescingStatisticsAppender$StopWatchesFromQueueIterator.getNext(GenericAsyncCoalescingStatisticsAppender.java:388)
	at org.perf4j.helpers.GenericAsyncCoalescingStatisticsAppender$StopWatchesFromQueueIterator.hasNext(GenericAsyncCoalescingStatisticsAppender.java:349)
	at org.perf4j.helpers.GroupingStatisticsIterator.getNext(GroupingStatisticsIterator.java:149)
	at org.perf4j.helpers.GroupingStatisticsIterator.hasNext(GroupingStatisticsIterator.java:102)
	at org.perf4j.helpers.GenericAsyncCoalescingStatisticsAppender$Dispatcher.run(GenericAsyncCoalescingStatisticsAppender.java:314)
	at java.lang.Thread.run(Thread.java:680)

"Low Memory Detector" daemon prio=5 tid=7fccc6003800 nid=0x1151ab000 runnable [00000000]
   java.lang.Thread.State: RUNNABLE

"C2 CompilerThread1" daemon prio=9 tid=7fccc6003000 nid=0x1150a8000 waiting on condition [00000000]
   java.lang.Thread.State: RUNNABLE

"C2 CompilerThread0" daemon prio=9 tid=7fccc6002000 nid=0x114fa5000 waiting on condition [00000000]
   java.lang.Thread.State: RUNNABLE

"JDWP Event Helper Thread" daemon prio=5 tid=7fccc6001800 nid=0x114ea2000 runnable [00000000]
   java.lang.Thread.State: RUNNABLE

"JDWP Transport Listener: dt_socket" daemon prio=5 tid=7fccc6000800 nid=0x114d9f000 runnable [00000000]
   java.lang.Thread.State: RUNNABLE

"Signal Dispatcher" daemon prio=9 tid=7fccc50e7000 nid=0x114c96000 runnable [00000000]
   java.lang.Thread.State: RUNNABLE

"Surrogate Locker Thread (Concurrent GC)" daemon prio=5 tid=7fccc50e6800 nid=0x114b93000 waiting on condition [00000000]
   java.lang.Thread.State: RUNNABLE

"Finalizer" daemon prio=8 tid=7fccc808c800 nid=0x114989000 in Object.wait() [114988000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7dc003f70> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118)
	- locked <7dc003f70> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134)
	at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:171)

"Reference Handler" daemon prio=10 tid=7fccc808b800 nid=0x114886000 in Object.wait() [114885000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7dc002c98> (a java.lang.ref.Reference$Lock)
	at java.lang.Object.wait(Object.java:485)
	at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116)
	- locked <7dc002c98> (a java.lang.ref.Reference$Lock)

"main" prio=5 tid=7fccc7800800 nid=0x10c217000 in Object.wait() [10c216000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <7dfe8b030> (a IceInternal.ObjectAdapterFactory)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ObjectAdapterFactory.waitForShutdown(ObjectAdapterFactory.java:65)
	- locked <7dfe8b030> (a IceInternal.ObjectAdapterFactory)
	at Ice.CommunicatorI.waitForShutdown(CommunicatorI.java:29)
	at ome.services.blitz.Entry.start(Entry.java:206)
	at ome.services.blitz.Entry.main(Entry.java:150)

"VM Thread" prio=9 tid=7fccc8087000 nid=0x114783000 runnable 

"Gang worker#0 (Parallel GC Threads)" prio=9 tid=7fccc8000000 nid=0x10f656000 runnable 

"Gang worker#1 (Parallel GC Threads)" prio=9 tid=7fccc8001000 nid=0x10f759000 runnable 

"Gang worker#2 (Parallel GC Threads)" prio=9 tid=7fccc4000800 nid=0x10f85c000 runnable 

"Gang worker#3 (Parallel GC Threads)" prio=9 tid=7fccc4001000 nid=0x10f95f000 runnable 

"Gang worker#4 (Parallel GC Threads)" prio=9 tid=7fccc4002000 nid=0x10fa62000 runnable 

"Gang worker#5 (Parallel GC Threads)" prio=9 tid=7fccc4002800 nid=0x10fb65000 runnable 

"Gang worker#6 (Parallel GC Threads)" prio=9 tid=7fccc4003000 nid=0x10fc68000 runnable 

"Gang worker#7 (Parallel GC Threads)" prio=9 tid=7fccc5001000 nid=0x10fd6b000 runnable 

"Concurrent Mark-Sweep GC Thread" prio=9 tid=7fccc8001800 nid=0x1143fd000 runnable 
"Gang worker#0 (Parallel CMS Threads)" prio=9 tid=7fccc50dd000 nid=0x1139f7000 runnable 

"Gang worker#1 (Parallel CMS Threads)" prio=9 tid=7fccc50dd800 nid=0x113afa000 runnable 

"VM Periodic Task Thread" prio=10 tid=7fccc6015000 nid=0x1152ae000 waiting on condition 

"Exception Catcher Thread" prio=10 tid=7fccc7801800 nid=0x10c47f000 runnable 
JNI global references: 12065

