[petr@ls25165 ~/Documents]$ jstack 18822 2013-06-04 11:39:48 Full thread dump Java HotSpot(TM) 64-Bit Server VM (20.45-b01-451 mixed mode): "Attach Listener" daemon prio=9 tid=11e397800 nid=0x115b78000 waiting on condition [00000000] java.lang.Thread.State: RUNNABLE "Thread-140" prio=6 tid=11d17c000 nid=0x115901000 waiting for monitor entry [115900000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.loadPlaneInfo(OMEROGateway.java:6262) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.loadPlaneInfo(OmeroImageServiceImpl.java:923) at org.openmicroscopy.shoola.env.data.views.calls.PlaneInfoLoader$1.doCall(PlaneInfoLoader.java:78) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-139" prio=6 tid=112961000 nid=0x11fb08000 waiting for monitor entry [11fb07000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getRenderingSettingsFor(OMEROGateway.java:5083) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getRenderingSettingsFor(OmeroImageServiceImpl.java:804) at org.openmicroscopy.shoola.env.data.views.calls.ChannelMetadataLoader$1.doCall(ChannelMetadataLoader.java:88) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-137" prio=6 tid=11d167000 nid=0x121a78000 in Object.wait() [121a76000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at java.awt.Dialog.show(Dialog.java:1112) - locked <7c2ef6d20> (a java.awt.Component$AWTTreeLock) at java.awt.Component.show(Component.java:1591) at java.awt.Component.setVisible(Component.java:1543) at java.awt.Window.setVisible(Window.java:843) at java.awt.Dialog.setVisible(Dialog.java:984) at org.openmicroscopy.shoola.util.ui.UIUtilities.centerAndShow(UIUtilities.java:557) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:397) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:358) at org.openmicroscopy.shoola.env.data.DataServicesFactory.sessionExpiredExit(DataServicesFactory.java:421) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleConnectionException(OMEROGateway.java:956) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:917) at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8403) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getNumberOfRenderingEngines(OmeroImageServiceImpl.java:164) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.loadRenderingControl(OmeroImageServiceImpl.java:475) at org.openmicroscopy.shoola.env.data.views.calls.RenderingControlLoader$1.doCall(RenderingControlLoader.java:97) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-134" prio=6 tid=11d17c800 nid=0x12176f000 waiting for monitor entry [12176e000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:125) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-130" prio=6 tid=11e398800 nid=0x11c1d5000 waiting for monitor entry [11c1d4000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:125) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-128" prio=6 tid=11295f800 nid=0x120f15000 in Object.wait() [120f13000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at java.awt.Dialog.show(Dialog.java:1112) - locked <7c2ef6d20> (a java.awt.Component$AWTTreeLock) at java.awt.Component.show(Component.java:1591) at java.awt.Component.setVisible(Component.java:1543) at java.awt.Window.setVisible(Window.java:843) at java.awt.Dialog.setVisible(Dialog.java:984) at org.openmicroscopy.shoola.util.ui.UIUtilities.centerAndShow(UIUtilities.java:557) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:397) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:358) at org.openmicroscopy.shoola.env.data.DataServicesFactory.sessionExpiredExit(DataServicesFactory.java:421) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleConnectionException(OMEROGateway.java:956) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:917) at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8403) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getNumberOfRenderingEngines(OmeroImageServiceImpl.java:164) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.loadRenderingControl(OmeroImageServiceImpl.java:475) at org.openmicroscopy.shoola.env.data.views.calls.RenderingControlLoader$1.doCall(RenderingControlLoader.java:97) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-126" prio=6 tid=11295e000 nid=0x120d0f000 waiting for monitor entry [120d0e000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:94) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-125" prio=6 tid=11295d000 nid=0x11fc0b000 waiting for monitor entry [11fc0a000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:125) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-122" prio=6 tid=11e396000 nid=0x11da04000 in Object.wait() [11da03000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at java.awt.Dialog.show(Dialog.java:1112) - locked <7c2ef6d20> (a java.awt.Component$AWTTreeLock) at java.awt.Component.show(Component.java:1591) at java.awt.Component.setVisible(Component.java:1543) at java.awt.Window.setVisible(Window.java:843) at java.awt.Dialog.setVisible(Dialog.java:984) at org.openmicroscopy.shoola.util.ui.UIUtilities.centerAndShow(UIUtilities.java:557) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:397) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:358) at org.openmicroscopy.shoola.env.data.DataServicesFactory.sessionExpiredExit(DataServicesFactory.java:421) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleConnectionException(OMEROGateway.java:956) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:484) - locked <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:94) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-121" prio=6 tid=11e395800 nid=0x11cff4000 waiting for monitor entry [11cff3000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:125) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-120" prio=6 tid=11e115000 nid=0x11c0d2000 in Object.wait() [11c0d1000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at java.awt.Dialog.show(Dialog.java:1112) - locked <7c2ef6d20> (a java.awt.Component$AWTTreeLock) at java.awt.Component.show(Component.java:1591) at java.awt.Component.setVisible(Component.java:1543) at java.awt.Window.setVisible(Window.java:843) at java.awt.Dialog.setVisible(Dialog.java:984) at org.openmicroscopy.shoola.util.ui.UIUtilities.centerAndShow(UIUtilities.java:557) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:397) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:358) at org.openmicroscopy.shoola.env.data.DataServicesFactory.sessionExpiredExit(DataServicesFactory.java:421) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleConnectionException(OMEROGateway.java:956) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:917) at org.openmicroscopy.shoola.env.data.OMEROGateway.getRenderingSettingsFor(OMEROGateway.java:5095) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getRenderingSettingsFor(OmeroImageServiceImpl.java:804) at org.openmicroscopy.shoola.env.data.views.calls.ChannelMetadataLoader$1.doCall(ChannelMetadataLoader.java:88) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-118" prio=6 tid=11d166000 nid=0x11f902000 in Object.wait() [11f900000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at java.awt.Dialog.show(Dialog.java:1112) - locked <7c2ef6d20> (a java.awt.Component$AWTTreeLock) at java.awt.Component.show(Component.java:1591) at java.awt.Component.setVisible(Component.java:1543) at java.awt.Window.setVisible(Window.java:843) at java.awt.Dialog.setVisible(Dialog.java:984) at org.openmicroscopy.shoola.util.ui.UIUtilities.centerAndShow(UIUtilities.java:557) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:397) at org.openmicroscopy.shoola.env.data.DataServicesFactory.showNotificationDialog(DataServicesFactory.java:358) at org.openmicroscopy.shoola.env.data.DataServicesFactory.sessionExpiredExit(DataServicesFactory.java:421) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleConnectionException(OMEROGateway.java:956) at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:917) at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8403) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getNumberOfRenderingEngines(OmeroImageServiceImpl.java:164) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.loadRenderingControl(OmeroImageServiceImpl.java:475) at org.openmicroscopy.shoola.env.data.views.calls.RenderingControlLoader$1.doCall(RenderingControlLoader.java:97) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-115" prio=6 tid=11d186000 nid=0x11d901000 waiting for monitor entry [11d900000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:128) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "Thread-111" prio=6 tid=11d691800 nid=0x119e88000 waiting for monitor entry [119e87000] java.lang.Thread.State: BLOCKED (on object monitor) at org.openmicroscopy.shoola.env.data.OMEROGateway.isSessionAlive(OMEROGateway.java:477) - waiting to lock <7c2ecdce8> (a org.openmicroscopy.shoola.env.data.OMEROGateway) at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:6168) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1810) at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:125) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) "net.sf.ehcache.CacheManager@71cf662f" daemon prio=5 tid=1128a4000 nid=0x11956d000 in Object.wait() [11956c000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) - waiting on <7c321af98> (a java.util.TaskQueue) at java.util.TimerThread.mainLoop(Timer.java:509) - locked <7c321af98> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:462) "TimerQueue" daemon prio=5 tid=118894000 nid=0x1187cd000 in Object.wait() [1187cc000] java.lang.Thread.State: TIMED_WAITING (on object monitor) at java.lang.Object.wait(Native Method) at javax.swing.TimerQueue.postExpiredTimers(TimerQueue.java:214) - locked <7c2ff2048> (a javax.swing.TimerQueue) at javax.swing.TimerQueue.run(TimerQueue.java:230) - locked <7c2ff2048> (a javax.swing.TimerQueue) at java.lang.Thread.run(Thread.java:680) "AWT-EventQueue-0" prio=6 tid=112036800 nid=0x11838e000 runnable [118384000] java.lang.Thread.State: RUNNABLE at apple.laf.JRSUIControl.paintToCGContext(Native Method) at apple.laf.JRSUIControl.paintToCGContext(JRSUIControl.java:225) - locked <7ce16c238> (a apple.laf.JRSUIControl) at apple.laf.JRSUIControl.paint(JRSUIControl.java:218) at com.apple.laf.AquaPainter$DirectOSXSurfacePainter.drawIntoCGContext(AquaPainter.java:56) at apple.awt.OSXSurfaceData.performNativeCocoaDrawing(Native Method) at apple.awt.OSXSurfaceData.performCocoaDrawing(OSXSurfaceData.java:1445) - locked <7ce18fb60> (a java.lang.Object) at com.apple.laf.AquaPainter$DirectOSXSurfacePainter.paint(AquaPainter.java:51) at com.apple.laf.AquaPainter.paint(AquaPainter.java:37) at com.apple.laf.AquaProgressBarUI.paint(AquaProgressBarUI.java:162) at com.apple.laf.AquaProgressBarUI.paint(AquaProgressBarUI.java:143) at javax.swing.plaf.ComponentUI.update(ComponentUI.java:153) at javax.swing.JComponent.paintComponent(JComponent.java:760) at javax.swing.JComponent.paint(JComponent.java:1037) at javax.swing.JComponent.paintChildren(JComponent.java:870) - locked <7c2ef6d20> (a java.awt.Component$AWTTreeLock) at javax.swing.JComponent.paint(JComponent.java:1046) at javax.swing.JComponent._paintImmediately(JComponent.java:5106) at javax.swing.JComponent.paintImmediately(JComponent.java:4890) at javax.swing.RepaintManager$3.run(RepaintManager.java:814) at javax.swing.RepaintManager$3.run(RepaintManager.java:802) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:802) at javax.swing.RepaintManager.paintDirtyRegions(RepaintManager.java:745) at javax.swing.RepaintManager.prePaintDirtyRegions(RepaintManager.java:725) at javax.swing.RepaintManager.access$1000(RepaintManager.java:46) at javax.swing.RepaintManager$ProcessingRunnable.run(RepaintManager.java:1684) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) at java.awt.EventQueue.access$400(EventQueue.java:82) at java.awt.EventQueue$2.run(EventQueue.java:669) at java.awt.EventQueue$2.run(EventQueue.java:667) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:678) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:205) at java.awt.Dialog$1.run(Dialog.java:1049) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) at java.awt.EventQueue.access$400(EventQueue.java:82) at java.awt.EventQueue$2.run(EventQueue.java:669) at java.awt.EventQueue$2.run(EventQueue.java:667) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98) at java.awt.EventQueue$3.run(EventQueue.java:683) at java.awt.EventQueue$3.run(EventQueue.java:681) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:680) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:205) at java.awt.Dialog$1.run(Dialog.java:1049) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) at java.awt.EventQueue.access$400(EventQueue.java:82) at java.awt.EventQueue$2.run(EventQueue.java:669) at java.awt.EventQueue$2.run(EventQueue.java:667) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98) at java.awt.EventQueue$3.run(EventQueue.java:683) at java.awt.EventQueue$3.run(EventQueue.java:681) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:680) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:205) at java.awt.Dialog$1.run(Dialog.java:1049) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) at java.awt.EventQueue.access$400(EventQueue.java:82) at java.awt.EventQueue$2.run(EventQueue.java:669) at java.awt.EventQueue$2.run(EventQueue.java:667) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98) at java.awt.EventQueue$3.run(EventQueue.java:683) at java.awt.EventQueue$3.run(EventQueue.java:681) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:680) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:205) at java.awt.Dialog$1.run(Dialog.java:1049) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) at java.awt.EventQueue.access$400(EventQueue.java:82) at java.awt.EventQueue$2.run(EventQueue.java:669) at java.awt.EventQueue$2.run(EventQueue.java:667) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98) at java.awt.EventQueue$3.run(EventQueue.java:683) at java.awt.EventQueue$3.run(EventQueue.java:681) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:680) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:205) at java.awt.Dialog$1.run(Dialog.java:1049) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) at java.awt.EventQueue.access$400(EventQueue.java:82) at java.awt.EventQueue$2.run(EventQueue.java:669) at java.awt.EventQueue$2.run(EventQueue.java:667) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98) at java.awt.EventQueue$3.run(EventQueue.java:683) at java.awt.EventQueue$3.run(EventQueue.java:681) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:680) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:205) at java.awt.Dialog$1.run(Dialog.java:1049) at java.awt.Dialog$3.run(Dialog.java:1101) at java.security.AccessController.doPrivileged(Native Method) at java.awt.Dialog.show(Dialog.java:1099) at java.awt.Component.show(Component.java:1591) at java.awt.Component.setVisible(Component.java:1543) at java.awt.Window.setVisible(Window.java:843) at java.awt.Dialog.setVisible(Dialog.java:984) at org.openmicroscopy.shoola.util.ui.UIUtilities.centerAndShow(UIUtilities.java:557) at org.openmicroscopy.shoola.env.ui.TaskBarManager.reconnect(TaskBarManager.java:533) at org.openmicroscopy.shoola.env.ui.TaskBarManager.logOut(TaskBarManager.java:543) at org.openmicroscopy.shoola.env.ui.TaskBarManager.handleLogOff(TaskBarManager.java:449) at org.openmicroscopy.shoola.env.ui.TaskBarManager.eventFired(TaskBarManager.java:1033) at org.openmicroscopy.shoola.env.event.EventBusImpl.dispatch(EventBusImpl.java:91) at org.openmicroscopy.shoola.env.event.EventBusImpl.post(EventBusImpl.java:222) at org.openmicroscopy.shoola.agents.treeviewer.actions.LogOffAction.actionPerformed(LogOffAction.java:94) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2028) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2351) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.AbstractButton.doClick(AbstractButton.java:389) at com.apple.laf.ScreenMenuItem.actionPerformed(ScreenMenuItem.java:95) at java.awt.MenuItem.processActionEvent(MenuItem.java:650) at java.awt.MenuItem.processEvent(MenuItem.java:609) at java.awt.MenuComponent.dispatchEventImpl(MenuComponent.java:343) at java.awt.MenuComponent.dispatchEvent(MenuComponent.java:331) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:713) at java.awt.EventQueue.access$400(EventQueue.java:82) at java.awt.EventQueue$2.run(EventQueue.java:669) at java.awt.EventQueue$2.run(EventQueue.java:667) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98) at java.awt.EventQueue$3.run(EventQueue.java:683) at java.awt.EventQueue$3.run(EventQueue.java:681) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:680) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188) at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) "Timer-0" daemon prio=5 tid=1109ab800 nid=0x11828b000 in Object.wait() [11828a000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at java.util.TimerThread.mainLoop(Timer.java:483) - locked <7c2ff2060> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:462) "Java2D Disposer" daemon prio=10 tid=1109a7000 nid=0x117fcb000 in Object.wait() [117fca000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118) - locked <7c2e5cd70> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134) at sun.java2d.Disposer.run(Disposer.java:127) at java.lang.Thread.run(Thread.java:680) "AWT-Shutdown" prio=5 tid=106209800 nid=0x114483000 in Object.wait() [114482000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at sun.awt.AWTAutoShutdown.run(AWTAutoShutdown.java:265) - locked <7c3015330> (a java.lang.Object) at java.lang.Thread.run(Thread.java:680) "AWT-AppKit" daemon prio=5 tid=106208800 nid=0x7fff758df180 runnable [00000000] java.lang.Thread.State: RUNNABLE "DestroyJavaVM" prio=5 tid=106200000 nid=0x105801000 waiting on condition [00000000] java.lang.Thread.State: RUNNABLE "Low Memory Detector" daemon prio=5 tid=11081a800 nid=0x111701000 runnable [00000000] java.lang.Thread.State: RUNNABLE "C2 CompilerThread1" daemon prio=9 tid=110819800 nid=0x11140a000 waiting on condition [00000000] java.lang.Thread.State: RUNNABLE "C2 CompilerThread0" daemon prio=9 tid=110819000 nid=0x111307000 waiting on condition [00000000] java.lang.Thread.State: RUNNABLE "Signal Dispatcher" daemon prio=9 tid=110818000 nid=0x111204000 runnable [00000000] java.lang.Thread.State: RUNNABLE "Surrogate Locker Thread (Concurrent GC)" daemon prio=5 tid=110817000 nid=0x111101000 waiting on condition [00000000] java.lang.Thread.State: RUNNABLE "Finalizer" daemon prio=8 tid=1060f0000 nid=0x110704000 in Object.wait() [110703000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118) - locked <7c2ff2000> (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134) at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:171) "Reference Handler" daemon prio=10 tid=1060ef000 nid=0x110601000 in Object.wait() [110600000] java.lang.Thread.State: WAITING (on object monitor) at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:485) at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116) - locked <7c3015348> (a java.lang.ref.Reference$Lock) "VM Thread" prio=9 tid=1060ea800 nid=0x1103f3000 runnable "Gang worker#0 (Parallel GC Threads)" prio=9 tid=106000800 nid=0x10a402000 runnable "Gang worker#1 (Parallel GC Threads)" prio=9 tid=106001000 nid=0x10a505000 runnable "Gang worker#2 (Parallel GC Threads)" prio=9 tid=106002000 nid=0x10a608000 runnable "Gang worker#3 (Parallel GC Threads)" prio=9 tid=106002800 nid=0x10a70b000 runnable "Gang worker#4 (Parallel GC Threads)" prio=9 tid=106003000 nid=0x10a80e000 runnable "Gang worker#5 (Parallel GC Threads)" prio=9 tid=106003800 nid=0x10a911000 runnable "Gang worker#6 (Parallel GC Threads)" prio=9 tid=106004800 nid=0x10aa14000 runnable "Gang worker#7 (Parallel GC Threads)" prio=9 tid=106005000 nid=0x10ab17000 runnable "Concurrent Mark-Sweep GC Thread" prio=9 tid=1060e2800 nid=0x10f754000 runnable "Gang worker#0 (Parallel CMS Threads)" prio=9 tid=1060e1000 nid=0x10ed4e000 runnable "Gang worker#1 (Parallel CMS Threads)" prio=9 tid=1060e1800 nid=0x10ee51000 runnable "VM Periodic Task Thread" prio=10 tid=11082c000 nid=0x111804000 waiting on condition "Exception Catcher Thread" prio=10 tid=106801800 nid=0x107101000 runnable JNI global references: 31197 [petr@ls25165 ~/Documents]$