Last login: Tue Jul 6 10:17:52 on console wjm:~ will$ jps -v 192 Jps -Dapplication.home=/System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home -Xms8m wjm:~ will$ cd Documents/workspace/Omero/components/tools/OmeroPy/scripts/ wjm:scripts will$ omero admin start Initializing /Users/will/Documents/workspace/Omero/dist/var/log No descriptor given. Using etc/grid/default.xml Waiting on startup. Use CTRL-C to exit wjm:scripts will$ omero -s localhost -u root script list Previously logged in to localhost as root Password: Created session 2d691403-bdc0-49bd-aa27-91564fc293b6 (root@localhost). Idle timeout: 10.0 min. Current group: system id | Official scripts -----+-------------------------------------------- 702 | /EMAN2/Run_Spider_Procedure.py 101 | /omero/analysis_scripts/FLIM.py 102 | /omero/export_scripts/Make_Movie.py 152 | /omero/figure_scripts/Movie_Figure.py 601 | /omero/figure_scripts/Movie_ROI_Figure.py 602 | /omero/figure_scripts/ROI_Split_Figure.py 155 | /omero/figure_scripts/Split_View_Figure.py 156 | /omero/figure_scripts/Thumbnail_Figure.py 603 | /omero/import_scripts/Populate_ROI.py 108 | /omero/setup_scripts/FLIM_initialise.py 109 | /omero/util_scripts/Combine_Images.py 158 | /omero/util_scripts/Images_From_ROIs.py wjm:scripts will$ omero -s localhost -u root script replace 702 EMAN2/Run_Spider_Procedure.py Using session 2d691403-bdc0-49bd-aa27-91564fc293b6 (root@localhost). Idle timeout: 10.0 min. Current group: system Traceback (most recent call last): File "/Users/will/Documents/workspace/Omero/dist/bin/omero", line 139, in rv = omero.cli.argv() File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 1111, in argv cli.invoke(args[1:]) File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 697, in invoke stop = self.onecmd(line, previous_args) File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 740, in onecmd self.execute(line, previous_args) File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 820, in execute args.func(args) File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/plugins/script.py", line 503, in replace client.upload(fpath, ofile=ofile) File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/clients.py", line 621, in upload prx.truncate(size) # ticket:2337 File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero_api_RawFileStore_ice.py", line 103, in truncate return _M_omero.api.RawFileStore._op_truncate.invoke(self, ((length, ), _ctx)) omero.InternalException: exception ::omero::InternalException { serverStackTrace = java.nio.channels.NonWritableChannelException at sun.nio.ch.FileChannelImpl.truncate(FileChannelImpl.java:328) at ome.services.blitz.repo.RepoRawFileStoreI.truncate_async(RepoRawFileStoreI.java:117) at omero.api._RawFileStoreTie.truncate_async(_RawFileStoreTie.java:99) at omero.api._RawFileStoreDisp.___truncate(_RawFileStoreDisp.java:223) at omero.api._RawFileStoreDisp.__dispatch(_RawFileStoreDisp.java:375) at IceInternal.Incoming.invoke(Incoming.java:159) at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) at Ice.ConnectionI.message(ConnectionI.java:972) at IceInternal.ThreadPool.run(ThreadPool.java:577) at IceInternal.ThreadPool.access$100(ThreadPool.java:12) at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) serverExceptionClass = java.nio.channels.NonWritableChannelException message = } wjm:scripts will$ jps -v 210 blitz.jar -Xmx256M -Djava.awt.headless=true -Dlog4j.configuration=etc/log4j-indexing.xml -Domero.logfile=var/log/${omero.name}.log -Domero.name=Indexer-0 207 blitz.jar -Xmx512M -Djava.awt.headless=true -Dlog4j.configuration=etc/log4j.xml -Domero.logfile=var/log/${omero.name}.log -Domero.name=Blitz-0 238 Jps -Dapplication.home=/System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home -Xms8m wjm:scripts will$ /usr/sbin/lsof -p 207 COMMAND PID USER FD TYPE DEVICE SIZE/OFF NODE NAME java 207 will cwd DIR 14,2 306 11954193 /Users/will/Documents/workspace/Omero/dist java 207 will txt REG 14,2 197232 11190927 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/java java 207 will txt REG 14,2 285552 11192782 /System/Library/Frameworks/JavaVM.framework/Versions/A/JavaVM java 207 will txt REG 14,2 32768 11995076 /private/var/folders/mk/mkOc3rWtEp8VZpBVn5VFpE+++TI/-Tmp-/hsperfdata_will/207 java 207 will txt REG 14,2 159264 11191535 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libverify.dylib java 207 will txt REG 14,2 331328 11192446 /System/Library/Frameworks/JavaVM.framework/Versions/A/Frameworks/JavaNativeFoundation.framework/Versions/A/JavaNativeFoundation java 207 will txt REG 14,2 555376 11191521 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libjava.jnilib java 207 will txt REG 14,2 227424 11191536 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libzip.jnilib java 207 will txt REG 14,2 336884 11190888 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/ui.jar java 207 will txt REG 14,2 889086 11190887 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/laf.jar java 207 will txt REG 14,2 15230480 11190244 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libclient.dylib java 207 will txt REG 14,2 280148 11190886 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/jsse.jar java 207 will txt REG 14,2 82642 11190884 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/jce.jar java 207 will txt REG 14,2 4668919 11190881 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/charsets.jar java 207 will txt REG 14,2 96242 11993133 /Users/will/Documents/workspace/Omero/dist/lib/server/perf4j.jar java 207 will txt REG 14,2 6470 11190253 /System/Library/Java/Extensions/AppleScriptEngine.jar java 207 will txt REG 14,2 22667289 11190882 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/classes.jar java 207 will txt REG 14,2 13946012 11993189 /Users/will/Documents/workspace/Omero/dist/lib/server/blitz.jar java 207 will txt REG 14,2 23445 11993090 /Users/will/Documents/workspace/Omero/dist/lib/server/slf4j-api.jar java 207 will txt REG 14,2 110784 11191529 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libmanagement.jnilib java 207 will txt REG 14,2 9679 11993111 /Users/will/Documents/workspace/Omero/dist/lib/server/slf4j-log4j12.jar java 207 will txt REG 14,2 24590 2151834 /Library/Java/Extensions/CsInline.jar java 207 will txt REG 14,2 6500500 2151832 /Library/Java/Extensions/calculator.jar java 207 will txt REG 14,2 67385 2151833 /Library/Java/Extensions/ChimePro.jar java 207 will txt REG 14,2 761342 2151835 /Library/Java/Extensions/dbb_client.jar java 207 will txt REG 14,2 2424933 2151836 /Library/Java/Extensions/dbb_helps.jar java 207 will txt REG 14,2 130045 2151838 /Library/Java/Extensions/dbb_images.jar java 207 will txt REG 14,2 657746 2151839 /Library/Java/Extensions/editor.jar java 207 will txt REG 14,2 618824 2151840 /Library/Java/Extensions/editor_help.jar java 207 will txt REG 14,2 68860 2151841 /Library/Java/Extensions/editor_legend.jar java 207 will txt REG 14,2 83183 2151842 /Library/Java/Extensions/editor_templates.jar java 207 will txt REG 14,2 247647 2151843 /Library/Java/Extensions/extlibs.jar java 207 will txt REG 14,2 718824 2151844 /Library/Java/Extensions/mdli_mt.jar java 207 will txt REG 14,2 127216 443158 /System/Library/Java/Extensions/CoreAudio.jar java 207 will txt REG 14,2 17045 443159 /System/Library/Java/Extensions/dns_sd.jar java 207 will txt REG 14,2 1245588 443160 /System/Library/Java/Extensions/j3daudio.jar java 207 will txt REG 14,2 1340102 443161 /System/Library/Java/Extensions/j3dcore.jar java 207 will txt REG 14,2 789164 443162 /System/Library/Java/Extensions/j3dutils.jar java 207 will txt REG 14,2 328952 443163 /System/Library/Java/Extensions/jai_codec.jar java 207 will txt REG 14,2 1893836 443164 /System/Library/Java/Extensions/jai_core.jar java 207 will txt REG 14,2 41239 443172 /System/Library/Java/Extensions/mlibwrapper_jai.jar java 207 will txt REG 14,2 12837 11190378 /System/Library/Java/Extensions/MRJToolkit.jar java 207 will txt REG 14,2 938686 6361965 /System/Library/Java/Extensions/QTJava.zip java 207 will txt REG 14,2 153874 443175 /System/Library/Java/Extensions/vecmath.jar java 207 will txt REG 14,2 4615 11993138 /Users/will/Documents/workspace/Omero/dist/lib/server/com.springsource.org.aopalliance.jar java 207 will txt REG 14,2 44334 11190965 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/apple_provider.jar java 207 will txt REG 14,2 8204 11190966 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/dnsns.jar java 207 will txt REG 14,2 449774 11190967 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/localedata.jar java 207 will txt REG 14,2 158419 11190968 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/sunjce_provider.jar java 207 will txt REG 14,2 404083 11190969 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/sunpkcs11.jar java 207 will txt REG 14,2 63167 11993085 /Users/will/Documents/workspace/Omero/dist/lib/server/FontBox.jar java 207 will txt REG 14,2 3321771 11993102 /Users/will/Documents/workspace/Omero/dist/lib/server/PDFBox.jar java 207 will txt REG 14,2 56290 11993136 /Users/will/Documents/workspace/Omero/dist/lib/server/activation.jar java 207 will txt REG 14,2 443432 11993100 /Users/will/Documents/workspace/Omero/dist/lib/server/antlr.jar java 207 will txt REG 14,2 16757 11993118 /Users/will/Documents/workspace/Omero/dist/lib/server/asm-attrs.jar java 207 will txt REG 14,2 26361 11993113 /Users/will/Documents/workspace/Omero/dist/lib/server/asm.jar java 207 will txt REG 14,2 322386 11993132 /Users/will/Documents/workspace/Omero/dist/lib/server/backport-util-concurrent.jar java 207 will txt REG 14,2 73710 11993077 /Users/will/Documents/workspace/Omero/dist/lib/server/batik-parser.jar java 207 will txt REG 14,2 128334 11993137 /Users/will/Documents/workspace/Omero/dist/lib/server/batik-util.jar java 207 will txt REG 14,2 5236 11993125 /Users/will/Documents/workspace/Omero/dist/lib/server/batik.jar java 207 will txt REG 14,2 1438847 11993104 /Users/will/Documents/workspace/Omero/dist/lib/server/bio-formats.jar java 207 will txt REG 14,2 1108473 11993093 /Users/will/Documents/workspace/Omero/dist/lib/server/jai_imageio.jar java 207 will txt REG 14,2 84992 11993116 /Users/will/Documents/workspace/Omero/dist/lib/server/loci-common.jar java 207 will txt REG 14,2 82587 11993075 /Users/will/Documents/workspace/Omero/dist/lib/server/mdbtools-java.jar java 207 will txt REG 14,2 395618 11993071 /Users/will/Documents/workspace/Omero/dist/lib/server/ome-xml.jar java 207 will txt REG 14,2 910347 11993141 /Users/will/Documents/workspace/Omero/dist/lib/server/poi-loci.jar java 207 will txt REG 14,2 60841 11993088 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-logging.jar java 207 will txt REG 14,2 257062 11993082 /Users/will/Documents/workspace/Omero/dist/lib/server/btm.jar java 207 will txt REG 14,2 471784 11993069 /Users/will/Documents/workspace/Omero/dist/lib/server/bufr.jar java 207 will txt REG 14,2 278682 11993083 /Users/will/Documents/workspace/Omero/dist/lib/server/cglib.jar java 207 will txt REG 14,2 83148 11993140 /Users/will/Documents/workspace/Omero/dist/lib/server/common.jar java 207 will txt REG 14,2 231320 11993080 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-beanutils.jar java 207 will txt REG 14,2 571259 11993074 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-collections.jar java 207 will txt REG 14,2 313898 11993092 /Users/will/Documents/workspace/Omero/dist/lib/server/dom4j.jar java 207 will txt REG 14,2 56262 11993063 /Users/will/Documents/workspace/Omero/dist/lib/server/dsl.jar java 207 will txt REG 14,2 150195 11993068 /Users/will/Documents/workspace/Omero/dist/lib/server/jamon.jar java 207 will txt REG 14,2 4464 11993073 /Users/will/Documents/workspace/Omero/dist/lib/server/jul-to-slf4j.jar java 207 will txt REG 14,2 351101 11993108 /Users/will/Documents/workspace/Omero/dist/lib/server/log4j.jar java 207 will txt REG 14,2 320296 11993084 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.aop.jar java 207 will txt REG 14,2 355598 11993065 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.core.jar java 207 will txt REG 14,2 778531 11992697 /Users/will/Documents/workspace/Omero/dist/lib/server/services.jar java 207 will txt REG 14,2 100884 11993072 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate-jpa-2.0-api.jar java 207 will txt REG 14,2 313784 11993143 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate-search.jar java 207 will txt REG 14,2 62574 11993086 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate-validator.jar java 207 will txt REG 14,2 3893179 11993098 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate.jar java 207 will txt REG 14,2 597476 11993087 /Users/will/Documents/workspace/Omero/dist/lib/server/javassist.jar java 207 will txt REG 14,2 822794 11993142 /Users/will/Documents/workspace/Omero/dist/lib/server/lucene-core.jar java 207 will txt REG 14,2 91152 11993103 /Users/will/Documents/workspace/Omero/dist/lib/server/lucene-highlighter.jar java 207 will txt REG 14,2 18505 11993106 /Users/will/Documents/workspace/Omero/dist/lib/server/lucene-spellchecker.jar java 207 will txt REG 14,2 1005276 11993096 /Users/will/Documents/workspace/Omero/dist/lib/server/model-psql.jar java 207 will txt REG 14,2 53088 11993079 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.asm.jar java 207 will txt REG 14,2 547837 11993078 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.beans.jar java 207 will txt REG 14,2 656978 11993095 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.context.jar java 207 will txt REG 14,2 156137 11993131 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.expression.jar java 207 will txt REG 14,2 377647 11993094 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.jdbc.jar java 207 will txt REG 14,2 331286 11993120 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.orm.jar java 207 will txt REG 14,2 228765 11993121 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.transaction.jar java 207 will txt REG 14,2 448141 11993099 /Users/will/Documents/workspace/Omero/dist/lib/server/postgresql.jar java 207 will txt REG 14,2 46725 11993128 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-codec.jar java 207 will txt REG 14,2 305001 11993076 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-httpclient.jar java 207 will txt REG 14,2 109043 11993115 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-io.jar java 207 will txt REG 14,2 207723 11993139 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-lang.jar java 207 will txt REG 14,2 42492 11993134 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-pool.jar java 207 will txt REG 14,2 263854 11993119 /Users/will/Documents/workspace/Omero/dist/lib/server/ehcache.jar java 207 will txt REG 14,2 13468 11993089 /Users/will/Documents/workspace/Omero/dist/lib/server/geronimo-spec-jta.jar java 207 will txt REG 14,2 312184 11993129 /Users/will/Documents/workspace/Omero/dist/lib/server/grib.jar java 207 will txt REG 14,2 237213 11993107 /Users/will/Documents/workspace/Omero/dist/lib/server/ice-db.jar java 207 will txt REG 14,2 1591295 11993064 /Users/will/Documents/workspace/Omero/dist/lib/server/ice.jar java 207 will txt REG 14,2 33687 11993135 /Users/will/Documents/workspace/Omero/dist/lib/server/ini4j.jar java 207 will txt REG 14,2 56709 11993097 /Users/will/Documents/workspace/Omero/dist/lib/server/java-getopt.jar java 207 will txt REG 14,2 8277 11993126 /Users/will/Documents/workspace/Omero/dist/lib/server/jsr107cache.jar java 207 will txt REG 14,2 599212 11993114 /Users/will/Documents/workspace/Omero/dist/lib/server/jts.jar java 207 will txt REG 14,2 371264 11993117 /Users/will/Documents/workspace/Omero/dist/lib/server/mail.jar java 207 will txt REG 14,2 2554323 11993130 /Users/will/Documents/workspace/Omero/dist/lib/server/netcdf.jar java 207 will txt REG 14,2 425779 11993105 /Users/will/Documents/workspace/Omero/dist/lib/server/ome-java.jar java 207 will txt REG 14,2 100091 11993070 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.context.support.jar java 207 will txt REG 14,2 388716 11993122 /Users/will/Documents/workspace/Omero/dist/lib/server/quartz.jar java 207 will txt REG 14,2 70882 11993091 /Users/will/Documents/workspace/Omero/dist/lib/server/rendering.jar java 207 will txt REG 14,2 38099 11993101 /Users/will/Documents/workspace/Omero/dist/lib/server/romio.jar java 207 will txt REG 14,2 768246 11993110 /Users/will/Documents/workspace/Omero/dist/lib/server/server.jar java 207 will txt REG 14,2 242753 11993067 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-ldap.jar java 207 will txt REG 14,2 160358 11993081 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-security-config.jar java 207 will txt REG 14,2 305489 11993127 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-security-core.jar java 207 will txt REG 14,2 84179 11993066 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-security-ldap.jar java 207 will txt REG 14,2 1010675 11993109 /Users/will/Documents/workspace/Omero/dist/lib/server/xercesImpl.jar java 207 will txt REG 14,2 194205 11993112 /Users/will/Documents/workspace/Omero/dist/lib/server/xml-apis.jar java 207 will txt REG 14,2 217936 11191530 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libnet.jnilib java 207 will txt REG 14,2 118368 11191531 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libnio.jnilib java 207 will txt REG 14,2 11616256 11193923 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/classes.jsa java 207 will txt REG 14,2 1059792 473858 /usr/lib/dyld java 207 will txt REG 14,2 146624512 11180383 /private/var/db/dyld/dyld_shared_cache_i386 java 207 will 0u CHR 3,2 0t0 72590724 /dev/null java 207 will 1w REG 14,2 0 11995061 /Users/will/Documents/workspace/Omero/dist/var/log/master.out java 207 will 2w REG 14,2 151 11995062 /Users/will/Documents/workspace/Omero/dist/var/log/master.err java 207 will 3r CHR 8,0 0t0 72916740 /dev/random java 207 will 4r CHR 8,1 0t276 72916612 /dev/urandom java 207 will 5w REG 14,2 41149 11995078 /Users/will/Documents/workspace/Omero/dist/var/log/Blitz-0.log java 207 will 7u IPv6 0x443a664 0t0 TCP localhost:49214->localhost:49213 (TIME_WAIT) java 207 will 8r REG 14,2 14320 11994112 /OMERO/FullText/_22v.cfs java 207 will 9r REG 14,2 21507 11994096 /OMERO/FullText/_22u.cfs java 207 will 10r REG 14,2 22151 11994070 /OMERO/FullText/_22t.cfs java 207 will 11r REG 14,2 1370 11994040 /OMERO/FullText/_22s.cfs java 207 will 12r REG 14,2 1370 11994027 /OMERO/FullText/_22r.cfs java 207 will 13r REG 14,2 998 11994014 /OMERO/FullText/_22q.cfs java 207 will 14r REG 14,2 2493 11994002 /OMERO/FullText/_22p.cfs java 207 will 15r REG 14,2 1370 11993990 /OMERO/FullText/_22o.cfs java 207 will 16r REG 14,2 1370 11993977 /OMERO/FullText/_22n.cfs java 207 will 17r REG 14,2 998 11993964 /OMERO/FullText/_22m.cfs java 207 will 18r REG 14,2 1370 11993952 /OMERO/FullText/_22l.cfs java 207 will 19r REG 14,2 1289 11993940 /OMERO/FullText/_22k.cfs java 207 will 20r REG 14,2 1363 11993908 /OMERO/FullText/_22j.cfs java 207 will 21r REG 14,2 998 11993886 /OMERO/FullText/_22i.cfs java 207 will 22r REG 14,2 1312 11993874 /OMERO/FullText/_22h.cfs java 207 will 23r REG 14,2 1294 11993862 /OMERO/FullText/_22g.cfs java 207 will 24r REG 14,2 1141 11945986 /OMERO/FullText/_22f.cfs java 207 will 25r REG 14,2 1141 11945743 /OMERO/FullText/_22e.cfs java 207 will 26r REG 14,2 1141 11945731 /OMERO/FullText/_22d.cfs java 207 will 27r REG 14,2 1141 11945719 /OMERO/FullText/_22c.cfs java 207 will 28r REG 14,2 1487207 11945706 /OMERO/FullText/_22b.cfs java 207 will 30u IPv6 0x6589e4c 0t0 TCP *:49236 (LISTEN) java 207 will 31u IPv6 0x6589be8 0t0 TCP [::127.0.0.1]:49233 (LISTEN) java 207 will 32 PIPE 0x5c620cc 16384 java 207 will 33 PIPE 0x5c62068 16384 java 207 will 34u CHR 3,2 0t0 72590724 /dev/null java 207 will 35 PIPE 0x5c62004 16384 java 207 will 36 PIPE 0x5c61fa0 16384 java 207 will 37u KQUEUE count=0, state=0x2 java 207 will 39 PIPE 0x5c61f3c 16384 java 207 will 40 PIPE 0x5c61ed8 16384 java 207 will 41 PIPE 0x5c61e74 16384 java 207 will 42 PIPE 0x5c61e10 16384 java 207 will 43u KQUEUE count=0, state=0x2 java 207 will 44 PIPE 0x5c61dac 16384 java 207 will 45 PIPE 0x5c61d48 16384 java 207 will 46 PIPE 0x5c61ce4 16384 java 207 will 47 PIPE 0x5c61c80 16384 java 207 will 48u KQUEUE count=0, state=0x2 java 207 will 52u IPv6 0x6588ff4 0t0 TCP [::10.12.1.83]:49236->[::10.12.1.83]:49239 (ESTABLISHED) java 207 will 53u IPv6 0x6588d90 0t0 TCP [::10.12.1.83]:49236->[::10.12.1.83]:49240 (ESTABLISHED) java 207 will 54 PIPE 0x5c63bc0 16384 java 207 will 55r REG 14,2 17590 11993913 /Users/will/Documents/workspace/Omero/dist/lib/scripts/EMAN2/Run_Spider_Procedure.py java 207 will 59u REG 14,2 0 11993790 /Users/will/Documents/workspace/Omero/dist/lib/scripts/.omero/repository/1fbdc711-4df4-40f2-be42-51e3a974de59/repo_uuid java 207 will 60u REG 14,2 30 11993791 /Users/will/Documents/workspace/Omero/dist/lib/scripts/.omero/repository/1fbdc711-4df4-40f2-be42-51e3a974de59/.lock java 207 will 61u REG 14,2 38 11471818 /OMERO/.omero/repository/1fbdc711-4df4-40f2-be42-51e3a974de59/repo_uuid java 207 will 62u REG 14,2 30 11471819 /OMERO/.omero/repository/1fbdc711-4df4-40f2-be42-51e3a974de59/.lock wjm:scripts will$ /usr/sbin/lsof -p 210 COMMAND PID USER FD TYPE DEVICE SIZE/OFF NODE NAME java 210 will cwd DIR 14,2 306 11954193 /Users/will/Documents/workspace/Omero/dist java 210 will txt REG 14,2 197232 11190927 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/java java 210 will txt REG 14,2 285552 11192782 /System/Library/Frameworks/JavaVM.framework/Versions/A/JavaVM java 210 will txt REG 14,2 32768 11995075 /private/var/folders/mk/mkOc3rWtEp8VZpBVn5VFpE+++TI/-Tmp-/hsperfdata_will/210 java 210 will txt REG 14,2 159264 11191535 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libverify.dylib java 210 will txt REG 14,2 331328 11192446 /System/Library/Frameworks/JavaVM.framework/Versions/A/Frameworks/JavaNativeFoundation.framework/Versions/A/JavaNativeFoundation java 210 will txt REG 14,2 555376 11191521 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libjava.jnilib java 210 will txt REG 14,2 227424 11191536 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libzip.jnilib java 210 will txt REG 14,2 336884 11190888 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/ui.jar java 210 will txt REG 14,2 889086 11190887 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/laf.jar java 210 will txt REG 14,2 15230480 11190244 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libclient.dylib java 210 will txt REG 14,2 280148 11190886 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/jsse.jar java 210 will txt REG 14,2 82642 11190884 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/jce.jar java 210 will txt REG 14,2 4668919 11190881 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/charsets.jar java 210 will txt REG 14,2 96242 11993133 /Users/will/Documents/workspace/Omero/dist/lib/server/perf4j.jar java 210 will txt REG 14,2 23445 11993090 /Users/will/Documents/workspace/Omero/dist/lib/server/slf4j-api.jar java 210 will txt REG 14,2 24590 2151834 /Library/Java/Extensions/CsInline.jar java 210 will txt REG 14,2 22667289 11190882 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Classes/classes.jar java 210 will txt REG 14,2 13946012 11993189 /Users/will/Documents/workspace/Omero/dist/lib/server/blitz.jar java 210 will txt REG 14,2 6500500 2151832 /Library/Java/Extensions/calculator.jar java 210 will txt REG 14,2 9679 11993111 /Users/will/Documents/workspace/Omero/dist/lib/server/slf4j-log4j12.jar java 210 will txt REG 14,2 67385 2151833 /Library/Java/Extensions/ChimePro.jar java 210 will txt REG 14,2 761342 2151835 /Library/Java/Extensions/dbb_client.jar java 210 will txt REG 14,2 2424933 2151836 /Library/Java/Extensions/dbb_helps.jar java 210 will txt REG 14,2 130045 2151838 /Library/Java/Extensions/dbb_images.jar java 210 will txt REG 14,2 657746 2151839 /Library/Java/Extensions/editor.jar java 210 will txt REG 14,2 618824 2151840 /Library/Java/Extensions/editor_help.jar java 210 will txt REG 14,2 68860 2151841 /Library/Java/Extensions/editor_legend.jar java 210 will txt REG 14,2 83183 2151842 /Library/Java/Extensions/editor_templates.jar java 210 will txt REG 14,2 247647 2151843 /Library/Java/Extensions/extlibs.jar java 210 will txt REG 14,2 718824 2151844 /Library/Java/Extensions/mdli_mt.jar java 210 will txt REG 14,2 6470 11190253 /System/Library/Java/Extensions/AppleScriptEngine.jar java 210 will txt REG 14,2 127216 443158 /System/Library/Java/Extensions/CoreAudio.jar java 210 will txt REG 14,2 17045 443159 /System/Library/Java/Extensions/dns_sd.jar java 210 will txt REG 14,2 1245588 443160 /System/Library/Java/Extensions/j3daudio.jar java 210 will txt REG 14,2 1340102 443161 /System/Library/Java/Extensions/j3dcore.jar java 210 will txt REG 14,2 789164 443162 /System/Library/Java/Extensions/j3dutils.jar java 210 will txt REG 14,2 328952 443163 /System/Library/Java/Extensions/jai_codec.jar java 210 will txt REG 14,2 1893836 443164 /System/Library/Java/Extensions/jai_core.jar java 210 will txt REG 14,2 41239 443172 /System/Library/Java/Extensions/mlibwrapper_jai.jar java 210 will txt REG 14,2 12837 11190378 /System/Library/Java/Extensions/MRJToolkit.jar java 210 will txt REG 14,2 938686 6361965 /System/Library/Java/Extensions/QTJava.zip java 210 will txt REG 14,2 153874 443175 /System/Library/Java/Extensions/vecmath.jar java 210 will txt REG 14,2 4615 11993138 /Users/will/Documents/workspace/Omero/dist/lib/server/com.springsource.org.aopalliance.jar java 210 will txt REG 14,2 44334 11190965 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/apple_provider.jar java 210 will txt REG 14,2 8204 11190966 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/dnsns.jar java 210 will txt REG 14,2 449774 11190967 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/localedata.jar java 210 will txt REG 14,2 158419 11190968 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/sunjce_provider.jar java 210 will txt REG 14,2 404083 11190969 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/lib/ext/sunpkcs11.jar java 210 will txt REG 14,2 63167 11993085 /Users/will/Documents/workspace/Omero/dist/lib/server/FontBox.jar java 210 will txt REG 14,2 3321771 11993102 /Users/will/Documents/workspace/Omero/dist/lib/server/PDFBox.jar java 210 will txt REG 14,2 56290 11993136 /Users/will/Documents/workspace/Omero/dist/lib/server/activation.jar java 210 will txt REG 14,2 443432 11993100 /Users/will/Documents/workspace/Omero/dist/lib/server/antlr.jar java 210 will txt REG 14,2 16757 11993118 /Users/will/Documents/workspace/Omero/dist/lib/server/asm-attrs.jar java 210 will txt REG 14,2 26361 11993113 /Users/will/Documents/workspace/Omero/dist/lib/server/asm.jar java 210 will txt REG 14,2 322386 11993132 /Users/will/Documents/workspace/Omero/dist/lib/server/backport-util-concurrent.jar java 210 will txt REG 14,2 73710 11993077 /Users/will/Documents/workspace/Omero/dist/lib/server/batik-parser.jar java 210 will txt REG 14,2 128334 11993137 /Users/will/Documents/workspace/Omero/dist/lib/server/batik-util.jar java 210 will txt REG 14,2 5236 11993125 /Users/will/Documents/workspace/Omero/dist/lib/server/batik.jar java 210 will txt REG 14,2 1438847 11993104 /Users/will/Documents/workspace/Omero/dist/lib/server/bio-formats.jar java 210 will txt REG 14,2 1108473 11993093 /Users/will/Documents/workspace/Omero/dist/lib/server/jai_imageio.jar java 210 will txt REG 14,2 84992 11993116 /Users/will/Documents/workspace/Omero/dist/lib/server/loci-common.jar java 210 will txt REG 14,2 82587 11993075 /Users/will/Documents/workspace/Omero/dist/lib/server/mdbtools-java.jar java 210 will txt REG 14,2 395618 11993071 /Users/will/Documents/workspace/Omero/dist/lib/server/ome-xml.jar java 210 will txt REG 14,2 910347 11993141 /Users/will/Documents/workspace/Omero/dist/lib/server/poi-loci.jar java 210 will txt REG 14,2 60841 11993088 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-logging.jar java 210 will txt REG 14,2 257062 11993082 /Users/will/Documents/workspace/Omero/dist/lib/server/btm.jar java 210 will txt REG 14,2 471784 11993069 /Users/will/Documents/workspace/Omero/dist/lib/server/bufr.jar java 210 will txt REG 14,2 278682 11993083 /Users/will/Documents/workspace/Omero/dist/lib/server/cglib.jar java 210 will txt REG 14,2 83148 11993140 /Users/will/Documents/workspace/Omero/dist/lib/server/common.jar java 210 will txt REG 14,2 231320 11993080 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-beanutils.jar java 210 will txt REG 14,2 571259 11993074 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-collections.jar java 210 will txt REG 14,2 313898 11993092 /Users/will/Documents/workspace/Omero/dist/lib/server/dom4j.jar java 210 will txt REG 14,2 56262 11993063 /Users/will/Documents/workspace/Omero/dist/lib/server/dsl.jar java 210 will txt REG 14,2 150195 11993068 /Users/will/Documents/workspace/Omero/dist/lib/server/jamon.jar java 210 will txt REG 14,2 4464 11993073 /Users/will/Documents/workspace/Omero/dist/lib/server/jul-to-slf4j.jar java 210 will txt REG 14,2 351101 11993108 /Users/will/Documents/workspace/Omero/dist/lib/server/log4j.jar java 210 will txt REG 14,2 320296 11993084 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.aop.jar java 210 will txt REG 14,2 355598 11993065 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.core.jar java 210 will txt REG 14,2 778531 11992697 /Users/will/Documents/workspace/Omero/dist/lib/server/services.jar java 210 will txt REG 14,2 100884 11993072 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate-jpa-2.0-api.jar java 210 will txt REG 14,2 313784 11993143 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate-search.jar java 210 will txt REG 14,2 62574 11993086 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate-validator.jar java 210 will txt REG 14,2 3893179 11993098 /Users/will/Documents/workspace/Omero/dist/lib/server/hibernate.jar java 210 will txt REG 14,2 597476 11993087 /Users/will/Documents/workspace/Omero/dist/lib/server/javassist.jar java 210 will txt REG 14,2 822794 11993142 /Users/will/Documents/workspace/Omero/dist/lib/server/lucene-core.jar java 210 will txt REG 14,2 91152 11993103 /Users/will/Documents/workspace/Omero/dist/lib/server/lucene-highlighter.jar java 210 will txt REG 14,2 18505 11993106 /Users/will/Documents/workspace/Omero/dist/lib/server/lucene-spellchecker.jar java 210 will txt REG 14,2 1005276 11993096 /Users/will/Documents/workspace/Omero/dist/lib/server/model-psql.jar java 210 will txt REG 14,2 53088 11993079 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.asm.jar java 210 will txt REG 14,2 547837 11993078 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.beans.jar java 210 will txt REG 14,2 656978 11993095 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.context.jar java 210 will txt REG 14,2 156137 11993131 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.expression.jar java 210 will txt REG 14,2 377647 11993094 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.jdbc.jar java 210 will txt REG 14,2 331286 11993120 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.orm.jar java 210 will txt REG 14,2 228765 11993121 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.transaction.jar java 210 will txt REG 14,2 448141 11993099 /Users/will/Documents/workspace/Omero/dist/lib/server/postgresql.jar java 210 will txt REG 14,2 46725 11993128 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-codec.jar java 210 will txt REG 14,2 305001 11993076 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-httpclient.jar java 210 will txt REG 14,2 109043 11993115 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-io.jar java 210 will txt REG 14,2 207723 11993139 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-lang.jar java 210 will txt REG 14,2 42492 11993134 /Users/will/Documents/workspace/Omero/dist/lib/server/commons-pool.jar java 210 will txt REG 14,2 263854 11993119 /Users/will/Documents/workspace/Omero/dist/lib/server/ehcache.jar java 210 will txt REG 14,2 13468 11993089 /Users/will/Documents/workspace/Omero/dist/lib/server/geronimo-spec-jta.jar java 210 will txt REG 14,2 312184 11993129 /Users/will/Documents/workspace/Omero/dist/lib/server/grib.jar java 210 will txt REG 14,2 237213 11993107 /Users/will/Documents/workspace/Omero/dist/lib/server/ice-db.jar java 210 will txt REG 14,2 1591295 11993064 /Users/will/Documents/workspace/Omero/dist/lib/server/ice.jar java 210 will txt REG 14,2 33687 11993135 /Users/will/Documents/workspace/Omero/dist/lib/server/ini4j.jar java 210 will txt REG 14,2 56709 11993097 /Users/will/Documents/workspace/Omero/dist/lib/server/java-getopt.jar java 210 will txt REG 14,2 8277 11993126 /Users/will/Documents/workspace/Omero/dist/lib/server/jsr107cache.jar java 210 will txt REG 14,2 599212 11993114 /Users/will/Documents/workspace/Omero/dist/lib/server/jts.jar java 210 will txt REG 14,2 371264 11993117 /Users/will/Documents/workspace/Omero/dist/lib/server/mail.jar java 210 will txt REG 14,2 2554323 11993130 /Users/will/Documents/workspace/Omero/dist/lib/server/netcdf.jar java 210 will txt REG 14,2 425779 11993105 /Users/will/Documents/workspace/Omero/dist/lib/server/ome-java.jar java 210 will txt REG 14,2 100091 11993070 /Users/will/Documents/workspace/Omero/dist/lib/server/org.springframework.context.support.jar java 210 will txt REG 14,2 388716 11993122 /Users/will/Documents/workspace/Omero/dist/lib/server/quartz.jar java 210 will txt REG 14,2 70882 11993091 /Users/will/Documents/workspace/Omero/dist/lib/server/rendering.jar java 210 will txt REG 14,2 38099 11993101 /Users/will/Documents/workspace/Omero/dist/lib/server/romio.jar java 210 will txt REG 14,2 768246 11993110 /Users/will/Documents/workspace/Omero/dist/lib/server/server.jar java 210 will txt REG 14,2 242753 11993067 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-ldap.jar java 210 will txt REG 14,2 160358 11993081 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-security-config.jar java 210 will txt REG 14,2 305489 11993127 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-security-core.jar java 210 will txt REG 14,2 84179 11993066 /Users/will/Documents/workspace/Omero/dist/lib/server/spring-security-ldap.jar java 210 will txt REG 14,2 1010675 11993109 /Users/will/Documents/workspace/Omero/dist/lib/server/xercesImpl.jar java 210 will txt REG 14,2 194205 11993112 /Users/will/Documents/workspace/Omero/dist/lib/server/xml-apis.jar java 210 will txt REG 14,2 110784 11191529 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libmanagement.jnilib java 210 will txt REG 14,2 118368 11191531 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libnio.jnilib java 210 will txt REG 14,2 217936 11191530 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/libnet.jnilib java 210 will txt REG 14,2 11616256 11193923 /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Libraries/classes.jsa java 210 will txt REG 14,2 1059792 473858 /usr/lib/dyld java 210 will txt REG 14,2 146624512 11180383 /private/var/db/dyld/dyld_shared_cache_i386 java 210 will 0u CHR 3,2 0t0 72590724 /dev/null java 210 will 1w REG 14,2 0 11995061 /Users/will/Documents/workspace/Omero/dist/var/log/master.out java 210 will 2w REG 14,2 151 11995062 /Users/will/Documents/workspace/Omero/dist/var/log/master.err java 210 will 3r CHR 8,0 0t0 72916740 /dev/random java 210 will 4r CHR 8,1 0t116 72916612 /dev/urandom java 210 will 5w REG 14,2 2941 11995079 /Users/will/Documents/workspace/Omero/dist/var/log/Indexer-0.log java 210 will 6u IPv6 0x443a400 0t0 TCP [::127.0.0.1]:49212->[::127.0.0.1]:postgresql (ESTABLISHED) java 210 will 7u IPv6 0x443a8c8 0t0 TCP localhost:49211->localhost:49210 (TIME_WAIT) java 210 will 8r REG 14,2 14320 11994112 /OMERO/FullText/_22v.cfs java 210 will 9r REG 14,2 21507 11994096 /OMERO/FullText/_22u.cfs java 210 will 10r REG 14,2 22151 11994070 /OMERO/FullText/_22t.cfs java 210 will 11r REG 14,2 1370 11994040 /OMERO/FullText/_22s.cfs java 210 will 12r REG 14,2 1370 11994027 /OMERO/FullText/_22r.cfs java 210 will 13r REG 14,2 998 11994014 /OMERO/FullText/_22q.cfs java 210 will 14r REG 14,2 2493 11994002 /OMERO/FullText/_22p.cfs java 210 will 15r REG 14,2 1370 11993990 /OMERO/FullText/_22o.cfs java 210 will 16r REG 14,2 1370 11993977 /OMERO/FullText/_22n.cfs java 210 will 17r REG 14,2 998 11993964 /OMERO/FullText/_22m.cfs java 210 will 18r REG 14,2 1370 11993952 /OMERO/FullText/_22l.cfs java 210 will 19r REG 14,2 1289 11993940 /OMERO/FullText/_22k.cfs java 210 will 20r REG 14,2 1363 11993908 /OMERO/FullText/_22j.cfs java 210 will 21r REG 14,2 998 11993886 /OMERO/FullText/_22i.cfs java 210 will 22r REG 14,2 1312 11993874 /OMERO/FullText/_22h.cfs java 210 will 23r REG 14,2 1294 11993862 /OMERO/FullText/_22g.cfs java 210 will 24r REG 14,2 1141 11945986 /OMERO/FullText/_22f.cfs java 210 will 25r REG 14,2 1141 11945743 /OMERO/FullText/_22e.cfs java 210 will 26r REG 14,2 1141 11945731 /OMERO/FullText/_22d.cfs java 210 will 27r REG 14,2 1141 11945719 /OMERO/FullText/_22c.cfs java 210 will 28r REG 14,2 1487207 11945706 /OMERO/FullText/_22b.cfs java 210 will 29u IPv6 0x443a19c 0t0 TCP [::127.0.0.1]:49225 (LISTEN) java 210 will 30 PIPE 0x5c6257c 16384 java 210 will 31 PIPE 0x5c62518 16384 java 210 will 32u CHR 3,2 0t0 72590724 /dev/null java 210 will 33 PIPE 0x5c624b4 16384 java 210 will 34 PIPE 0x5c62450 16384 java 210 will 35u KQUEUE count=0, state=0x2 java 210 will 37 PIPE 0x5c623ec 16384 java 210 will 38 PIPE 0x5c62388 16384 java 210 will 39 PIPE 0x5c62324 16384 java 210 will 40 PIPE 0x5c622c0 16384 java 210 will 41u KQUEUE count=0, state=0x2 java 210 will 42 PIPE 0x5c6225c 16384 java 210 will 43 PIPE 0x5c621f8 16384 java 210 will 44 PIPE 0x5c62194 16384 java 210 will 45 PIPE 0x5c62130 16384 java 210 will 46u KQUEUE count=0, state=0x2 java 210 will 48u IPv6 0x443980c 0t0 TCP *:49228 (LISTEN) java 210 will 57 PIPE 0x5c63968 16384 wjm:scripts will$ omero admin diagnostics ================================================================================ OMERO Diagnostics Beta-4.2.0-DEV ================================================================================ Commands: java -version 1.5.0 (/usr/bin/java) Commands: python -V 2.5.1 (/usr/bin/python) Commands: icegridnode --version 3.3.1 (/opt/Ice-3.3.1/bin/icegridnode) Commands: icegridadmin --version 3.3.1 (/opt/Ice-3.3.1/bin/icegridadmin) Commands: psql --version 8.3.8 (/Library/PostgreSQL/8.3/bin/psql) Server: icegridnode running Server: Blitz-0 active (pid = 207, enabled) Server: DropBox active (pid = 208, enabled) Server: FileServer active (pid = 209, enabled) Server: Indexer-0 active (pid = 210, enabled) Server: MonitorServer active (pid = 211, enabled) Server: OMERO.Glacier2 active (pid = 212, enabled) Server: OMERO.IceStorm active (pid = 213, enabled) Server: Processor-0 active (pid = 214, enabled) Server: Repository-1 error: node `repo' couldn't be reached: the node is not active Server: Tables-0 inactive (disabled) Server: TestDropBox inactive (enabled) Server: Web inactive (enabled) Log dir: /Users/will/Documents/workspace/Omero/dist/var/log exists Log files: Blitz-0.log 41.0 KB errors=1 warnings=9 Log files: DropBox.log 1.0 KB errors=1 warnings=0 Log files: FileServer.log 0.0 KB Log files: Indexer-0.log 2.0 KB errors=0 warnings=9 Log files: MonitorServer.log 1.0 KB errors=1 warnings=0 Log files: OMEROweb.log n/a Log files: Processor-0.log 0.0 KB Log files: Tables-0.log n/a Log files: TestDropBox.log n/a Log files: master.err 0.0 KB Log files: master.out 0.0 KB Log files: Total size 0.05 MB Parsing Blitz-0.log:[line:17] => Server restarted <= Environment:OMERO_HOME=(unset) Environment:OMERO_NODE=(unset) Environment:OMERO_MASTER=(unset) Environment:PATH=/Applications/EMAN2//EMAN2.cvs/bin:/Applications/EMAN2//EMAN2.cvs/sparx/bin:/Applications/IMOD/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/Library/PostgreSQL/8.3/bin/:/Applications/Chimera.app/Contents/Resources/bin/:/Users/will/Documents/workspace/Omero/dist/bin/:/opt/Ice-3.3.1/bin:/usr/local/HDF5/bin:/Applications/spiderweb/spider/bin/:/Applications/spiderweb/web/bin/ Environment:ICE_HOME=/opt/Ice-3.3.1 Environment:LD_LIBRARY_PATH=/usr/local/HDF5/lib:/opt/SZIP/lib Environment:DYLD_LIBRARY_PATH=/Applications/IMOD/lib::/opt/Ice-3.3.1/lib:/opt/hdf/lib wjm:scripts will$