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Task #10069 (new)

Opened 11 years ago

Last modified 8 years ago

XML modulo annotation creation

Reported by: jburel Owned by:
Priority: major Milestone: Metadata
Component: General Version: n.a.
Keywords: n.a. Cc: i.munro@…, jamoore, ajpatterson
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

When a std file is imported, a XML modulo annotation will be linked to the file we can then check if the file has modulo annotation and handle it differently

If an OME-TIFF is created with information like

<SA:StructuredAnnotations>
    <SA:XMLAnnotation ID="Annotation:3" Namespace="openmicroscopy.org/omero/dimension/modulo">
        <SA:Value>
            <Modulo namespace="http://www.openmicroscopy.org/Schemas/Additions/2011-09">
                <ModuloAlongZ Type="angle" Unit="degree">

(see https://www.openmicroscopy.org/site/support/file-formats/working-with-ome-xml/6d-7d-and-8d-storage)
an XML annotation could be created with the content extracted from the OME-TIFF. file This will imply that the modulo details are duplicated. If an annotation is not created, the content of the OME-TIFF will have to be parsed every time we need to handle that image, which could be costly.

Having a XML annotation implies that all the files will be handled the same way.

Change History (3)

comment:3 Changed 8 years ago by jamoore

  • Milestone changed from 5.x to Metadata

comment:1 Changed 8 years ago by jamoore

Referencing ticket #7855 has changed sprint.

comment:2 Changed 8 years ago by jamoore

Referencing ticket #7855 has changed sprint.

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