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Task #10292 (closed)

Opened 7 years ago

Closed 5 years ago

Last modified 5 years ago

Allow bfconvert to write one tile per file

Reported by: mlinkert Owned by: mlinkert
Priority: major Milestone: 5.1.0
Component: Bio-Formats Version: 5.0.1
Keywords: n.a. Cc: rleigh, jamoore, ofra.golani@…
Resources: n.a. Referenced By: https://trello.com/c/Lo7Cf1eP/7-refactor-omero-code-down-to-bf
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

See http://lists.openmicroscopy.org.uk/pipermail/ome-users/2013-January/003503.html

It may make sense to do this at the same time as the PyramidWriter? move.

Change History (9)

comment:1 Changed 7 years ago by jmoore

  • Milestone changed from Unscheduled to OMERO-5
  • Sprint set to FS Demo 2

Moving to newly created demo sprint, though it's unclear if this will be a requirement for end of February.

comment:2 Changed 7 years ago by jmoore

  • Sprint FS Demo 2 deleted

Not included in fs demo 2 tag. Removing from sprint

comment:3 Changed 7 years ago by jmoore

  • Sprint set to FS Demo 3

comment:4 Changed 7 years ago by jamoore

  • Sprint changed from FS Demo 3 to FS Demo 4

comment:5 Changed 6 years ago by jamoore

  • Milestone changed from 5.x to 5.0.3
  • Sprint FS demo 4.x deleted
  • Version set to 5.0.1

What's the new best milestone for PyramidWriter? like changes?

comment:6 Changed 5 years ago by mlinkert

  • Milestone changed from 5.0.3 to 5.1.0

comment:7 Changed 5 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed

comment:8 Changed 5 years ago by Melissa Linkert <melissa@…>

(In [445ac94090efdabf84e8a704e32da377ce51688a/bioformats.git] on branch develop) bfconvert: allow the saved tile size to be overridden

The -tilex and -tiley options control the tile size; if not specified,
the reader's getOptimalTile* values are still used. Overriding the tile
size forces tile-wise saving, even for non-big images.

See #10292.

comment:9 Changed 5 years ago by Melissa Linkert <melissa@…>

(In [118efe08ca6932dd2b8eb48ad6023f88f9d22916/bioformats.git] on branch develop) bfconvert: allow each tile to be written to a separate file

This also includes some minor refactoring to reduce the size of
testConvert.

See #10292.

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