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Task #10631 (closed)

Opened 11 years ago

Closed 9 years ago

Bug: Viewing Varian FDF

Reported by: jburel Owned by:
Priority: major Milestone: 5.x
Component: Client Version: 5.0.8
Keywords: n.a. Cc: ux@…, wmoore
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

Image img_slab001image001echo001.fdf Cannot create Thumbnail mssge in Importer, thumbnail black in Data Manager, Full viewer does not open - "...not a valid image...), no thumbnail in Web, "out of Bound exception.." on opening in Web, in IJ + loci tools 4 4 6 it opens and displays fine

Change History (2)

comment:1 Changed 10 years ago by jburel

Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. 
Cannot start the Rendering Engine.
	at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:951)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.generateRenderingEngine(OMEROGateway.java:3116)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.createRenderingEngine(OMEROGateway.java:3085)
	at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.loadRenderingControl(OmeroImageServiceImpl.java:490)
	at org.openmicroscopy.shoola.env.data.views.calls.RenderingControlLoader$1.doCall(RenderingControlLoader.java:97)
	at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
	at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
	at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
	at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
	at java.lang.Thread.run(Thread.java:680)
Caused by: omero.InternalException
    serverStackTrace = "ome.conditions.InternalException:  Wrapped Exception: (java.lang.ArrayIndexOutOfBoundsException):
                        null
                        "
    serverExceptionClass = "ome.conditions.InternalException"
    message = " Wrapped Exception: (java.lang.ArrayIndexOutOfBoundsException):
               null"
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
	at java.lang.Class.newInstance0(Class.java:357)

comment:2 Changed 9 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed
  • Version set to 5.0.8

The file in question contains 32-bit pixel data; importing into OMERO and viewing with Insight using the current develop merge builds works as expected now that 32-bit rendering is supported.

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