Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #10884 (closed)

Opened 11 years ago

Closed 11 years ago

Bug: Metamorph reader does not populate PhysicalSizeZ

Reported by: mlinkert Owned by: mlinkert
Priority: major Milestone: Unscheduled
Component: Bio-Formats Version: n.a.
Keywords: n.a. Cc: rleigh, wpchan@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

See http://lists.openmicroscopy.org.uk/pipermail/ome-users/2013-May/003711.html

It looks like the PhysicalSizeZ would need to be calculated by averaging the differences between the Z positions

Change History (2)

comment:1 Changed 11 years ago by mlinkert

  • Cc wpchan@… added

comment:2 Changed 11 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed

Fixed with: https://github.com/openmicroscopy/bioformats/pull/521

Note that a new build with this fix is not yet available.

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.64340 sec.)

We're Hiring!