Task #10903 (new)
Opened 11 years ago
Last modified 9 years ago
Add support for Ariol data
| Reported by: | mlinkert | Owned by: | |
|---|---|---|---|
| Priority: | major | Milestone: | Unscheduled |
| Component: | Bio-Formats | Version: | 5.0.0 |
| Keywords: | new-format, external | Cc: | rleigh, andreas.heindl@… |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
See http://lists.openmicroscopy.org.uk/pipermail/ome-users/2013-May/003716.html and the files in data/ariol/andreas/.
It has been pointed out on the mailing list that the .cat files are an XML header and TIFF file concatenated together.
Change History (3)
comment:1 Changed 11 years ago by mlinkert
- Cc andreas.heindl@… added
comment:2 Changed 11 years ago by mlinkert
- Keywords new-format added
- Version set to 5.0.0
comment:3 Changed 9 years ago by mlinkert
- Keywords external added
- Owner mlinkert deleted
Note: See
TracTickets for help on using
tickets.
You may also have a look at Agilo extensions to the ticket.
Note that the ariol/andreas data is a different format from the ariol/karen data, so covering both will likely require two readers. The ariol/karen data should be fairly straightforward to support, as pixel data is stored in separate JPEG files and the metadata is in a fairly readable XML file. The ariol/andreas data is going to be a little trickier; as noted above, it is XML concatenated with TIFF, but keep in mind that multiple TIFF files have been concatenated, so take care to check that the whole file is read.