Task #11089 (closed)
BUG: Loss of connection after Move
Reported by: | pwalczysko | Owned by: | jburel |
---|---|---|---|
Priority: | blocker | Milestone: | 5.0.0-beta1 |
Component: | Insight | Version: | n.a. |
Keywords: | n.a. | Cc: | ux@…, fs@…, sbesson, hflynn |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | 0.0d |
Sprint: | FS demo 4.4 |
Description
Happened during the demo 4_3 on 07-06-13 at approx 12:37 (see the attached log).
After a 5-image MIF was moved back and forth between groups read-only-1 and read-write-1 (not targeted moves, orphaned images only), a crash with popup reporting the loss of connection happened.
For detailed workflow see the movie "demo 4_3" on team/pwalczysko/demo 4_3/demo 4_3.mov" - time on the movie 22:44 - 25:46.
The exception from the Inishgt log :
2013-06-07 12:37:22,770 DEBUG [copy.shoola.env.data.DataServicesFactory] (Thread-339) Connection ErrorIce.ObjectNotExistException id.name = "2b3981e6-3d11-495f-a5d1-e5302c5213b2omero.api.ThumbnailStore" id.category = "45575535-47c1-492b-8436-f811e82ff6cb" facet = "" operation = "setPixelsId" at IceInternal.Outgoing.invoke(Outgoing.java:147) at omero.api._ThumbnailStoreDelM.setPixelsId(_ThumbnailStoreDelM.java:903) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1279) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1251) at org.openmicroscopy.shoola.env.data.OMEROGateway.needDefault(OMEROGateway.java:1973) at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3354) at org.openmicroscopy.shoola.env.data.OMEROGateway.getThumbnail(OMEROGateway.java:3331) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:544) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.loadThumbail(ThumbnailLoader.java:128) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.access$700(ThumbnailLoader.java:73) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader$2.doCall(ThumbnailLoader.java:198) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Connection ErrorIce.ObjectNotExistException id.name = "2b3981e6-3d11-495f-a5d1-e5302c5213b2omero.api.ThumbnailStore" id.category = "45575535-47c1-492b-8436-f811e82ff6cb" facet = "" operation = "setPixelsId" at IceInternal.Outgoing.invoke(Outgoing.java:147) at omero.api._ThumbnailStoreDelM.setPixelsId(_ThumbnailStoreDelM.java:903) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1279) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1251) at org.openmicroscopy.shoola.env.data.OMEROGateway.needDefault(OMEROGateway.java:1973) at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3354) at org.openmicroscopy.shoola.env.data.OMEROGateway.getThumbnail(OMEROGateway.java:3331) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:544) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.loadThumbail(ThumbnailLoader.java:128) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.access$700(ThumbnailLoader.java:73) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader$2.doCall(ThumbnailLoader.java:198) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Exception in thread "Thread-339" 2013-06-07 12:37:23,823 DEBUG [copy.shoola.env.data.DataServicesFactory] (Thread-339) Connection ErrorIce.CommunicatorDestroyedException at IceInternal.Instance.objectAdapterFactory(Instance.java:122) at Ice.ObjectPrxHelperBase.createDelegate(ObjectPrxHelperBase.java:997) at Ice.ObjectPrxHelperBase.__getDelegate(ObjectPrxHelperBase.java:946) at omero.api.ThumbnailStorePrxHelper.getThumbnail(ThumbnailStorePrxHelper.java:596) at omero.api.ThumbnailStorePrxHelper.getThumbnail(ThumbnailStorePrxHelper.java:570) at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3361) at org.openmicroscopy.shoola.env.data.OMEROGateway.getThumbnail(OMEROGateway.java:3331) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:544) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.loadThumbail(ThumbnailLoader.java:128) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.access$700(ThumbnailLoader.java:73) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader$2.doCall(ThumbnailLoader.java:198) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Connection ErrorIce.CommunicatorDestroyedException at IceInternal.Instance.objectAdapterFactory(Instance.java:122) at Ice.ObjectPrxHelperBase.createDelegate(ObjectPrxHelperBase.java:997) at Ice.ObjectPrxHelperBase.__getDelegate(ObjectPrxHelperBase.java:946) at omero.api.ThumbnailStorePrxHelper.getThumbnail(ThumbnailStorePrxHelper.java:596) at omero.api.ThumbnailStorePrxHelper.getThumbnail(ThumbnailStorePrxHelper.java:570) at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3361) at org.openmicroscopy.shoola.env.data.OMEROGateway.getThumbnail(OMEROGateway.java:3331) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:544) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.loadThumbail(ThumbnailLoader.java:128) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.access$700(ThumbnailLoader.java:73) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader$2.doCall(ThumbnailLoader.java:198) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Exception in thread "Thread-339" 2013-06-07 12:37:28,666 ERROR [ola.env.data.views.calls.ThumbnailLoader] (Thread-339) Cannot retrieve thumbnail: org.openmicroscopy.shoola.env.rnd.RenderingServiceException: Get Thumbnail at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:551) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.loadThumbail(ThumbnailLoader.java:128) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.access$700(ThumbnailLoader.java:73) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader$2.doCall(ThumbnailLoader.java:198) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Caused by: org.openmicroscopy.shoola.env.rnd.RenderingServiceException: Cannot get thumbnail at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3370) at org.openmicroscopy.shoola.env.data.OMEROGateway.getThumbnail(OMEROGateway.java:3331) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:544) ... 10 more Caused by: Ice.CommunicatorDestroyedException at IceInternal.Instance.objectAdapterFactory(Instance.java:122) at Ice.ObjectPrxHelperBase.createDelegate(ObjectPrxHelperBase.java:997) at Ice.ObjectPrxHelperBase.__getDelegate(ObjectPrxHelperBase.java:946) at omero.api.ThumbnailStorePrxHelper.getThumbnail(ThumbnailStorePrxHelper.java:596) at omero.api.ThumbnailStorePrxHelper.getThumbnail(ThumbnailStorePrxHelper.java:570) at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3361) ... 12 more 2013-06-07 12:37:28,698 DEBUG [copy.shoola.env.data.DataServicesFactory] (Thread-339) Connection ErrorIce.CommunicatorDestroyedException at IceInternal.OutgoingConnectionFactory.findConnectionByEndpoint(OutgoingConnectionFactory.java:451) at IceInternal.OutgoingConnectionFactory.create(OutgoingConnectionFactory.java:265) at IceInternal.RoutableReference.createConnection(RoutableReference.java:848) at IceInternal.RoutableReference$1.setEndpoints(RoutableReference.java:484) at IceInternal.RouterInfo.getClientEndpoints(RouterInfo.java:92) at IceInternal.RoutableReference.getConnection(RoutableReference.java:476) at IceInternal.ConnectRequestHandler.connect(ConnectRequestHandler.java:41) at Ice._ObjectDelM.setup(_ObjectDelM.java:275) at Ice.ObjectPrxHelperBase.createDelegate(ObjectPrxHelperBase.java:1007) at Ice.ObjectPrxHelperBase.__getDelegate(ObjectPrxHelperBase.java:946) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1277) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1251) at org.openmicroscopy.shoola.env.data.OMEROGateway.needDefault(OMEROGateway.java:1973) at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3354) at org.openmicroscopy.shoola.env.data.OMEROGateway.getThumbnail(OMEROGateway.java:3331) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:544) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.loadThumbail(ThumbnailLoader.java:128) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.access$700(ThumbnailLoader.java:73) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader$2.doCall(ThumbnailLoader.java:198) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Connection ErrorIce.CommunicatorDestroyedException at IceInternal.OutgoingConnectionFactory.findConnectionByEndpoint(OutgoingConnectionFactory.java:451) at IceInternal.OutgoingConnectionFactory.create(OutgoingConnectionFactory.java:265) at IceInternal.RoutableReference.createConnection(RoutableReference.java:848) at IceInternal.RoutableReference$1.setEndpoints(RoutableReference.java:484) at IceInternal.RouterInfo.getClientEndpoints(RouterInfo.java:92) at IceInternal.RoutableReference.getConnection(RoutableReference.java:476) at IceInternal.ConnectRequestHandler.connect(ConnectRequestHandler.java:41) at Ice._ObjectDelM.setup(_ObjectDelM.java:275) at Ice.ObjectPrxHelperBase.createDelegate(ObjectPrxHelperBase.java:1007) at Ice.ObjectPrxHelperBase.__getDelegate(ObjectPrxHelperBase.java:946) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1277) at omero.api.ThumbnailStorePrxHelper.setPixelsId(ThumbnailStorePrxHelper.java:1251) at org.openmicroscopy.shoola.env.data.OMEROGateway.needDefault(OMEROGateway.java:1973) at org.openmicroscopy.shoola.env.data.OMEROGateway.retrieveThumbnail(OMEROGateway.java:3354) at org.openmicroscopy.shoola.env.data.OMEROGateway.getThumbnail(OMEROGateway.java:3331) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.getThumbnail(OmeroImageServiceImpl.java:544) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.loadThumbail(ThumbnailLoader.java:128) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader.access$700(ThumbnailLoader.java:73) at org.openmicroscopy.shoola.env.data.views.calls.ThumbnailLoader$2.doCall(ThumbnailLoader.java:198) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Exception in thread "Thread-339" 2013-06-07 12:37:40,337 INFO [opy.shoola.env.rnd.PixelsServicesFactory] (nitializer) Heap memory usage: max 1060372480 2013-06-07 12:37:40,343 INFO [enmicroscopy.shoola.env.init.TaskBarInit] (nitializer) Loaded L&F: com.apple.laf.AquaLookAndFeel 2013-06-07 12:37:46,378 INFO [copy.shoola.env.data.DataServicesFactory] (nitializer) Server version: 5.0.0 Client version: 5.0.0-alpha4-331-c50aa6a-dirty-ice33-b300 os_name: Mac OS X os_arch: x86_64 java_version: 1.6.0_45 os_version: 10.8.3 2013-06-07 12:37:46,527 INFO [y.shoola.env.data.login.LoginServiceImpl] (nitializer) Logged onto OMERO at: gretzky.openmicroscopy.org.uk User Name: user-4 -- Password: ***
Change History (5)
comment:1 Changed 11 years ago by jburel
- Sprint changed from FS Demo 4.3 to FS demo 4.4
comment:2 Changed 11 years ago by jburel
- Remaining Time set to 0.5
- Status changed from new to accepted
comment:3 Changed 11 years ago by jburel
comment:4 Changed 11 years ago by jburel
- Remaining Time changed from 0.5 to 0
- Resolution set to fixed
- Status changed from accepted to closed
comment:5 Changed 11 years ago by jburel <j.burel@…>
(In [9127671daae4e64a48950fb3f0686e6e2ee7bfc9/ome.git] on branch develop) Fix browsing of orphaned container. (see #11089)
The problem was due to the fact that the wrong "Orphaned container" was displayed i.e. only the user information in the path and not the group.