Task #11095 (closed)
Bug: FileStitcher does not handle some RGB images
| Reported by: | omero-qa | Owned by: | mlinkert |
|---|---|---|---|
| Priority: | minor | Milestone: | 5.1.1 |
| Component: | from QA | Version: | 5.0.8 |
| Keywords: | n.a. | Cc: | |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | 0.0d |
| Sprint: | n.a. |
Description
https://www.openmicroscopy.org/qa2/qa2/qa/feedback/7328/
Attempting to use FileStitcher? on this dataset results in only the *ch00.tif files being opened, even though the pattern is correctly detected. Each of the .tif files is a single RGB image.
Change History (6)
comment:1 Changed 11 years ago by jburel
comment:2 Changed 11 years ago by mlinkert
No, this bug still hasn't been fixed. Importing into OMERO is not a sufficient test; it needs to be checked with 'showinf -stitch' or opening in ImageJ with "Group files with similar names" checked.
comment:3 Changed 11 years ago by jburel
Thanks for the clarification.
comment:4 Changed 9 years ago by mlinkert
- Milestone changed from Unscheduled to 5.1.1
- Version set to 5.0.8
Moving to 5.1.1 for triage.
comment:5 Changed 9 years ago by mlinkert
- Resolution set to fixed
- Status changed from new to closed
comment:6 Changed 9 years ago by Melissa Linkert <melissa@…>
- Remaining Time set to 0
(In [7fb76e55285dcf3ee3ee58c04c6fc00d4bebc47b/bioformats.git] on branch develop) FileStitcher?: fix file indexing for RGB images
Fixes #11095.
Note: See
TracTickets for help on using
tickets.
You may also have a look at Agilo extensions to the ticket.
Selected the folder 7328. All images imported correctly as single Tiff. All images can be viewed.
Everything seems to work.