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Task #11098 (closed)

Opened 6 years ago

Closed 6 years ago

BUG: pyslid mixes up Z/C/T when calculating features

Reported by: spli Owned by: spli
Priority: blocker Milestone: 5.0.0-beta1
Component: Scripting Version: n.a.
Keywords: searcher Cc: analysis@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: FS demo 4.4

Description

Pyslid retrieves image planes using a utility method
​pyslid.utilities.getPlane (conn,iid,pixels=0,channel=0,zslice=0,timepoint=0)

​pyslid.features.calculate with SLF33 features (and others) messes up the arguments:
pyslid.utilities.getPlane (conn,iid,zslice,channels[0],timepoint)

Change History (3)

comment:1 Changed 6 years ago by spli

  • Status changed from new to accepted

comment:3 Changed 6 years ago by spli

  • Resolution set to fixed
  • Status changed from accepted to closed

Submodule update in ​https://github.com/openmicroscopy/omero_searcher/pull/5

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