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Task #11148 (closed)

Opened 6 years ago

Closed 6 years ago

Bug: Cellomics screen incorrectly imported

Reported by: omero-qa Owned by: mlinkert
Priority: minor Milestone: Unscheduled
Component: Bio-Formats Version: 4.4.9
Keywords: n.a. Cc: svcostes@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

https://www.openmicroscopy.org/qa2/qa2/qa/feedback/7352/

Imported:

1) Directory containing the screen
2) File within the screen

Both behave identically.

1770 images total (in original dataset)
1230 orphaned images (after import for both (1) and (2))

Note that both retain the filename chosen or automatically selected
for import for all orphaned images.  It looks like these aren't being
treated as part of the screen--reader bug here?


From the original screen filenames:
 354 d0
 354 d1
 354 d2
 354 o1
 354 o2

Fields
 300 f00
 300 f01
 300 f02
 300 f03
 210 f04
 135 f05
 100 f06
  75 f07
  50 f08

Change History (4)

comment:1 Changed 6 years ago by rleigh

Orphaned filenames are named like this:

MFGTMP-PC_130509120002_B02f02d2.C01 [Well B02, Field #00]

It's missing the dn/on information, so it's not clear how the reader is handling these.

comment:2 Changed 6 years ago by rleigh

  • Component changed from from QA to Bio-Formats

comment:3 Changed 6 years ago by mlinkert

  • Owner changed from mlinkert-x to mlinkert

comment:4 Changed 6 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed
  • Version set to 4.4.9
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