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Task #11342 (closed)

Opened 6 years ago

Closed 5 years ago

Last modified 5 years ago

Expand list of annotatable objects

Reported by: ajpatterson Owned by: ajpatterson
Priority: major Milestone: 5.1.0-m1
Component: Specification Version: 5.0.0-beta1
Keywords: schema Cc: jamoore, mlinkert, jburel, rleigh
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

Only a limited subset of the objects in the model are annotatable. Expand this selection to include more objects, especially under Instrument.

Change History (12)

comment:1 Changed 6 years ago by ajpatterson

  • Keywords schema added

comment:2 Changed 6 years ago by ajpatterson

Elements I propose to add annotations to

Detector
Dichroic
Filter
Instrument
LightPath
LightSource
Objective

see https://www.openmicroscopy.org/site/community/minutes/minigroup/ome-xml-meetings/2013.08.29-detector

comment:3 Changed 6 years ago by ajpatterson

  • Status changed from new to accepted

comment:4 Changed 5 years ago by jamoore

Is the above still the most current list, Andrew? Do you have the *reverse* list somewhere? What would remain unannotatable?

comment:5 Changed 5 years ago by jburel

To exclude from the current list of annotatable objects are pixels and wellsample and move the annotation to image.

comment:6 Changed 5 years ago by jamoore

+1. And which other types are let unannotated?

comment:7 Changed 5 years ago by ajpatterson

No, the decision on WellSample was reversed, it is not being removed in this PR.

I can look at making a reverse list today.

Last edited 5 years ago by ajpatterson (previous) (diff)

comment:8 Changed 5 years ago by jburel

Since HCS review will take some time, probably better to exclude it, and put the annotation to image only.
Having it on both has been very painful. WellSample? is no more that an image with a location.

comment:9 Changed 5 years ago by ajpatterson

The reverse list was at the bottom of these minutes:
https://www.openmicroscopy.org/site/community/minutes/minigroup/ome-xml-meetings/2013.08.29-detector

Element left without annotations

either these do not seem to be a good candidate for annotation, or they are in a 1-to-1 relationship with an element that is annotated/proposed.

  • Arc
  • BinaryFile
  • BinData
  • Filament
  • Laser
  • LightEmittingDiode
  • MicrobeamManipulation
  • Microscope
  • OME
  • Pump
  • Shape (and all the shape sub-types)
  • StageLabel
  • StructuredAnnotations
  • TransmittanceRange

comment:10 Changed 5 years ago by ajpatterson

  • Resolution set to fixed
  • Status changed from accepted to closed

comment:11 Changed 5 years ago by ajpatterson

  • Milestone changed from 5.x to 5.1.0-m1

comment:12 Changed 5 years ago by Andrew J Patterson <workonly@…>

(In [57029037256ba3e883a60c7ef0e81c6231ad8547/bioformats.git] on branch develop) Expanding list of annotatable objects(3) see #11342

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