Task #12257 (new)
netCDF cannot open certain large .ims files
|Reported by:||mlinkert||Owned by:|
|Keywords:||ImarisHDFReader, hdf, netcdf||Cc:||l.maier@…|
See QA 9217 and http://lists.openmicroscopy.org.uk/pipermail/ome-users/2014-May/004407.html. Attempting to read the file throws an IllegalArgumentException? during setId, which is coming from deep within NetcdfFile?.open. This is a > 1GB file, but e have successfully opened larger .ims files so size alone is likely not the issue.
libhdf5 seems to read the file correctly - at least, 'h5ls' and 'h5dump' show more or less what I would expect.