Task #12387 (new)
Opened 10 years ago
Last modified 8 years ago
BUG:Figure generation PDF
Reported by: | omero-qa | Owned by: | wmoore |
---|---|---|---|
Priority: | minor | Milestone: | Unscheduled |
Component: | Search | Version: | 5.0.2 |
Keywords: | n.a. | Cc: | k.h.gillen@… |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | n.a. |
Sprint: | n.a. |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/9286/
Comment: Either this .figure PDF, or one created at the same time, by a CLS user is causing the Indexer to crash with the following:
14:26:35 Exception in thread "Thread-70" Exception in thread "Thread-71" java.lang.NullPointerException?
at org.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:194)
at org.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:182)
at org.pdfbox.pdmodel.PDDocumentCatalog.getAllPages(PDDocumentCatalog.java:226)
at org.pdfbox.util.PDFTextStripper.writeText(PDFTextStripper.java:216)
at ome.services.fulltext.PdfThread?.run(PdfParser?.java:92)
java.lang.NullPointerException?
at org.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:194)
at org.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:182)
at org.pdfbox.pdmodel.PDDocumentCatalog.getAllPages(PDDocumentCatalog.java:226)
at org.pdfbox.util.PDFTextStripper.writeText(PDFTextStripper.java:216)
at ome.services.fulltext.PdfThread?.run(PdfParser?.java:92)
File submitted with permission from content owner Amy Gerc.
Change History (7)
comment:1 Changed 9 years ago by wmoore
- Component changed from from QA to Search
- Milestone changed from Unscheduled to 5.1.1
comment:2 Changed 9 years ago by wmoore
- Milestone changed from 5.1.1 to 5.1.2
Anyone know how to tell which file is generating Indexing errors?
comment:3 Changed 9 years ago by jamoore
If you can get the EventLog? from Indexer-0.log, then a query will tell you.
comment:4 Changed 9 years ago by wmoore
- Milestone changed from 5.1.2 to 5.1.3
comment:5 Changed 9 years ago by jamoore
- Milestone changed from 5.1.4 to OMERO-5.1.4
Splitting 5.1.4 due to milestone decoupling
comment:6 Changed 9 years ago by sbesson
- Milestone changed from OMERO-5.1.4 to 5.x
As discussed with Will earlier today, pushing the non-critical Web tickets out of 5.1.4
comment:7 Changed 8 years ago by jamoore
- Milestone changed from 5.x to Unscheduled
Tried to repeat locally, and didn't see the errors above, but saw other errors and warnings.
Tricky to tell where these are coming from - adding a file annotation can trigger re-indexing that includes a bunch of files that failed for the indexer earlier, not necessarily for the file you're adding.