id,summary,reporter,owner,description,type,status,priority,milestone,component,version,resolution,keywords,cc,drp_resources,i_links,o_links,remaining_time,sprint 12612,Bug: JPEG test and read failures with OpenJDK8,rleigh,mlinkert,"I've tested the current OpenJDK8 JDK on Ubuntu 14.10 with current bioformats develop. OpenJDK7 seems to work fine on the same system. There are two JPEG-related test failures in formats-bsd (testJPEG and testALT_JPEG), shown below. This appears OpenJDK-specific; it's working with Oracle JDK8 on MacOS X. I thought it might be due to libjpeg6 being obsoleted if it relied on native libs, but this isn't the case. The JPEG reader and writer seem affected, but this doesn't seem to affect JPEG2000 reading. Impact: JPEG reading and writing seems broken across the board with OpenJDK8. {{{ testJPEG ""java.lang.NoClassDefFoundError: Could not initialize class com.sun.imageio.plugins.jpeg.JPEGImageWriter at com.sun.imageio.plugins.jpeg.JPEGImageWriterSpi.createWriterInstance(JPEGImageWriterSpi.java:96) at javax.imageio.spi.ImageWriterSpi.createWriterInstance(ImageWriterSpi.java:351) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:843) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:827) at javax.imageio.ImageIO.getWriter(ImageIO.java:1596) at javax.imageio.ImageIO.write(ImageIO.java:1578) at loci.formats.codec.JPEGCodec.compress(JPEGCodec.java:86) at loci.formats.tiff.TiffCompression.compress(TiffCompression.java:359) at loci.formats.utests.tiff.TiffCompressionCompressTest.testJPEG(TiffCompressionCompressTest.java:122) ... Removed 23 stack frames java.lang.NoClassDefFoundError: Could not initialize class com.sun.imageio.plugins.jpeg.JPEGImageWriter at com.sun.imageio.plugins.jpeg.JPEGImageWriterSpi.createWriterInstance(JPEGImageWriterSpi.java:96) at javax.imageio.spi.ImageWriterSpi.createWriterInstance(ImageWriterSpi.java:351) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:843) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:827) at javax.imageio.ImageIO.getWriter(ImageIO.java:1596) at javax.imageio.ImageIO.write(ImageIO.java:1578) at loci.formats.codec.JPEGCodec.compress(JPEGCodec.java:86) at loci.formats.tiff.TiffCompression.compress(TiffCompression.java:359) at loci.formats.utests.tiff.TiffCompressionCompressTest.testJPEG(TiffCompressionCompressTest.java:122) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:497) at org.testng.internal.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:80) at org.testng.internal.Invoker.invokeMethod(Invoker.java:714) at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:901) at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:1231) at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:127) at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:111) at org.testng.TestRunner.privateRun(TestRunner.java:767) at org.testng.TestRunner.run(TestRunner.java:617) at org.testng.SuiteRunner.runTest(SuiteRunner.java:334) at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:329) at org.testng.SuiteRunner.privateRun(SuiteRunner.java:291) at org.testng.SuiteRunner.run(SuiteRunner.java:240) at org.testng.SuiteRunnerWorker.runSuite(SuiteRunnerWorker.java:52) at org.testng.SuiteRunnerWorker.run(SuiteRunnerWorker.java:86) at org.testng.TestNG.runSuitesSequentially(TestNG.java:1198) at org.testng.TestNG.runSuitesLocally(TestNG.java:1123) at org.testng.TestNG.run(TestNG.java:1031) at org.testng.TestNG.privateMain(TestNG.java:1338) at org.testng.TestNG.main(TestNG.java:1307) "" com.sun.imageio.plugins.jpeg.JPEGImageWriterSpi.createWriterInstance(JPEGImageWriterSpi.java:96) javax.imageio.spi.ImageWriterSpi.createWriterInstance(ImageWriterSpi.java:351) javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:843) javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:827) javax.imageio.ImageIO.getWriter(ImageIO.java:1596) javax.imageio.ImageIO.write(ImageIO.java:1578) loci.formats.codec.JPEGCodec.compress(JPEGCodec.java:86) loci.formats.tiff.TiffCompression.compress(TiffCompression.java:359) loci.formats.utests.tiff.TiffCompressionCompressTest.testJPEG(TiffCompressionCompressTest.java:122) sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) java.lang.reflect.Method.invoke(Method.java:497) org.testng.internal.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:80) org.testng.internal.Invoker.invokeMethod(Invoker.java:714) org.testng.internal.Invoker.invokeTestMethod(Invoker.java:901) org.testng.internal.Invoker.invokeTestMethods(Invoker.java:1231) org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:127) org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:111) org.testng.TestRunner.privateRun(TestRunner.java:767) org.testng.TestRunner.run(TestRunner.java:617) org.testng.SuiteRunner.runTest(SuiteRunner.java:334) org.testng.SuiteRunner.runSequentially(SuiteRunner.java:329) org.testng.SuiteRunner.privateRun(SuiteRunner.java:291) org.testng.SuiteRunner.run(SuiteRunner.java:240) org.testng.SuiteRunnerWorker.runSuite(SuiteRunnerWorker.java:52) org.testng.SuiteRunnerWorker.run(SuiteRunnerWorker.java:86) org.testng.TestNG.runSuitesSequentially(TestNG.java:1198) org.testng.TestNG.runSuitesLocally(TestNG.java:1123) org.testng.TestNG.run(TestNG.java:1031) org.testng.TestNG.privateMain(TestNG.java:1338) org.testng.TestNG.main(TestNG.java:1307) }}} {{{ testALT_JPEG ""java.lang.UnsatisfiedLinkError: com.sun.imageio.plugins.jpeg.JPEGImageWriter.initWriterIDs(Ljava/lang/Class;Ljava/lang/Class;)V at com.sun.imageio.plugins.jpeg.JPEGImageWriter.initWriterIDs(Native Method) at com.sun.imageio.plugins.jpeg.JPEGImageWriter.(JPEGImageWriter.java:186) at com.sun.imageio.plugins.jpeg.JPEGImageWriterSpi.createWriterInstance(JPEGImageWriterSpi.java:96) at javax.imageio.spi.ImageWriterSpi.createWriterInstance(ImageWriterSpi.java:351) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:843) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:827) at javax.imageio.ImageIO.getWriter(ImageIO.java:1596) at javax.imageio.ImageIO.write(ImageIO.java:1578) at loci.formats.codec.JPEGCodec.compress(JPEGCodec.java:86) at loci.formats.tiff.TiffCompression.compress(TiffCompression.java:359) at loci.formats.utests.tiff.TiffCompressionCompressTest.testALT_JPEG(TiffCompressionCompressTest.java:177) ... Removed 23 stack frames java.lang.UnsatisfiedLinkError: com.sun.imageio.plugins.jpeg.JPEGImageWriter.initWriterIDs(Ljava/lang/Class;Ljava/lang/Class;)V at com.sun.imageio.plugins.jpeg.JPEGImageWriter.initWriterIDs(Native Method) at com.sun.imageio.plugins.jpeg.JPEGImageWriter.(JPEGImageWriter.java:186) at com.sun.imageio.plugins.jpeg.JPEGImageWriterSpi.createWriterInstance(JPEGImageWriterSpi.java:96) at javax.imageio.spi.ImageWriterSpi.createWriterInstance(ImageWriterSpi.java:351) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:843) at javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:827) at javax.imageio.ImageIO.getWriter(ImageIO.java:1596) at javax.imageio.ImageIO.write(ImageIO.java:1578) at loci.formats.codec.JPEGCodec.compress(JPEGCodec.java:86) at loci.formats.tiff.TiffCompression.compress(TiffCompression.java:359) at loci.formats.utests.tiff.TiffCompressionCompressTest.testALT_JPEG(TiffCompressionCompressTest.java:177) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:497) at org.testng.internal.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:80) at org.testng.internal.Invoker.invokeMethod(Invoker.java:714) at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:901) at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:1231) at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:127) at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:111) at org.testng.TestRunner.privateRun(TestRunner.java:767) at org.testng.TestRunner.run(TestRunner.java:617) at org.testng.SuiteRunner.runTest(SuiteRunner.java:334) at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:329) at org.testng.SuiteRunner.privateRun(SuiteRunner.java:291) at org.testng.SuiteRunner.run(SuiteRunner.java:240) at org.testng.SuiteRunnerWorker.runSuite(SuiteRunnerWorker.java:52) at org.testng.SuiteRunnerWorker.run(SuiteRunnerWorker.java:86) at org.testng.TestNG.runSuitesSequentially(TestNG.java:1198) at org.testng.TestNG.runSuitesLocally(TestNG.java:1123) at org.testng.TestNG.run(TestNG.java:1031) at org.testng.TestNG.privateMain(TestNG.java:1338) at org.testng.TestNG.main(TestNG.java:1307) "" com.sun.imageio.plugins.jpeg.JPEGImageWriter.initWriterIDs(Native Method) com.sun.imageio.plugins.jpeg.JPEGImageWriter.(JPEGImageWriter.java:186) com.sun.imageio.plugins.jpeg.JPEGImageWriterSpi.createWriterInstance(JPEGImageWriterSpi.java:96) javax.imageio.spi.ImageWriterSpi.createWriterInstance(ImageWriterSpi.java:351) javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:843) javax.imageio.ImageIO$ImageWriterIterator.next(ImageIO.java:827) javax.imageio.ImageIO.getWriter(ImageIO.java:1596) javax.imageio.ImageIO.write(ImageIO.java:1578) loci.formats.codec.JPEGCodec.compress(JPEGCodec.java:86) loci.formats.tiff.TiffCompression.compress(TiffCompression.java:359) loci.formats.utests.tiff.TiffCompressionCompressTest.testALT_JPEG(TiffCompressionCompressTest.java:177) sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) java.lang.reflect.Method.invoke(Method.java:497) org.testng.internal.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:80) org.testng.internal.Invoker.invokeMethod(Invoker.java:714) org.testng.internal.Invoker.invokeTestMethod(Invoker.java:901) org.testng.internal.Invoker.invokeTestMethods(Invoker.java:1231) org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:127) org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:111) org.testng.TestRunner.privateRun(TestRunner.java:767) org.testng.TestRunner.run(TestRunner.java:617) org.testng.SuiteRunner.runTest(SuiteRunner.java:334) org.testng.SuiteRunner.runSequentially(SuiteRunner.java:329) org.testng.SuiteRunner.privateRun(SuiteRunner.java:291) org.testng.SuiteRunner.run(SuiteRunner.java:240) org.testng.SuiteRunnerWorker.runSuite(SuiteRunnerWorker.java:52) org.testng.SuiteRunnerWorker.run(SuiteRunnerWorker.java:86) org.testng.TestNG.runSuitesSequentially(TestNG.java:1198) org.testng.TestNG.runSuitesLocally(TestNG.java:1123) org.testng.TestNG.run(TestNG.java:1031) org.testng.TestNG.privateMain(TestNG.java:1338) org.testng.TestNG.main(TestNG.java:1307) }}}",task,closed,major,5.1.1,Bio-Formats,5.0.5,invalid,imageio jdk8,mtbcarroll,,,,,