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Task #12657 (closed)

Opened 9 years ago

Closed 9 years ago

Bug: HistogramPlot IndexOutOfBoundsException

Reported by: dlindner Owned by: dlindner
Priority: minor Milestone: Unscheduled
Component: Insight Version: 5.0.5
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

See ​https://www.openmicroscopy.org/qa2/qa/feedback/10368/ 


java.lang.Exception: Abnormal termination due to an uncaught exception.
java.lang.IndexOutOfBoundsException: Index: 2, Size: 2
at java.util.ArrayList.RangeCheck(ArrayList.java:547)
at java.util.ArrayList.get(ArrayList.java:322)
at org.openmicroscopy.shoola.util.ui.graphutils.HistogramPlot.(HistogramPlot.java:129)
at org.openmicroscopy.shoola.agents.measurement.view.GraphPane.drawHistogram(GraphPane.java:395)
at org.openmicroscopy.shoola.agents.measurement.view.GraphPane.buildGraphsAndDisplay(GraphPane.java:468)
at org.openmicroscopy.shoola.agents.measurement.view.GraphPane.displayAnalysisResults(GraphPane.java:652)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerUI.displayAnalysisResults(MeasurementViewerUI.java:1380)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerComponent.setStatsShapes(MeasurementViewerComponent.java:700)
at org.openmicroscopy.shoola.agents.measurement.Analyser.handleResult(Analyser.java:151)
at org.openmicroscopy.shoola.env.data.events.DSCallAdapter.eventFired(DSCallAdapter.java:90)
at org.openmicroscopy.shoola.env.data.views.BatchCallMonitor$1.run(BatchCallMonitor.java:124)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:715)
at java.awt.EventQueue.access$400(EventQueue.java:82)
at java.awt.EventQueue$2.run(EventQueue.java:676)
at java.awt.EventQueue$2.run(EventQueue.java:674)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:86)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:685)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Abnormal termination due to an uncaught exception.
java.lang.IndexOutOfBoundsException: Index: 2, Size: 2
at java.util.ArrayList.RangeCheck(ArrayList.java:547)
at java.util.ArrayList.get(ArrayList.java:322)
at org.openmicroscopy.shoola.util.ui.graphutils.HistogramPlot.(HistogramPlot.java:129)
at org.openmicroscopy.shoola.agents.measurement.view.GraphPane.drawHistogram(GraphPane.java:395)
at org.openmicroscopy.shoola.agents.measurement.view.GraphPane.buildGraphsAndDisplay(GraphPane.java:468)
at org.openmicroscopy.shoola.agents.measurement.view.GraphPane.displayAnalysisResults(GraphPane.java:652)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerUI.displayAnalysisResults(MeasurementViewerUI.java:1380)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerComponent.setStatsShapes(MeasurementViewerComponent.java:700)
at org.openmicroscopy.shoola.agents.measurement.Analyser.handleResult(Analyser.java:151)
at org.openmicroscopy.shoola.env.data.events.DSCallAdapter.eventFired(DSCallAdapter.java:90)
at org.openmicroscopy.shoola.env.data.views.BatchCallMonitor$1.run(BatchCallMonitor.java:124)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:715)
at java.awt.EventQueue.access$400(EventQueue.java:82)
at java.awt.EventQueue$2.run(EventQueue.java:676)
at java.awt.EventQueue$2.run(EventQueue.java:674)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:86)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:685)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Exception in thread "AWT-EventQueue-0"


at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.showErrorDialog(UserNotifierImpl.java:191)
at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:291)
at org.openmicroscopy.shoola.env.AbnormalExitHandler.doTermination(AbnormalExitHandler.java:147)
at org.openmicroscopy.shoola.env.AbnormalExitHandler.terminate(AbnormalExitHandler.java:85)
at org.openmicroscopy.shoola.env.AWTExceptionHanlder.handle(AWTExceptionHanlder.java:99)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at java.awt.EventDispatchThread.handleException(EventDispatchThread.java:412)
at java.awt.EventDispatchThread.processException(EventDispatchThread.java:318)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:312)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)

Change History (2)

comment:1 Changed 9 years ago by dlindner

See also ​https://www.openmicroscopy.org/qa2/qa/feedback/10414/

Don't know how to reproduce. However there is a flaw in HistogramPlot:121 : The AND in 'newLegends.size() != newData.size() && newLegends.size() != newColours.size())' should actually be an OR. But this won't fix the problem, just throw an other exception.

comment:2 Changed 9 years ago by dlindner

  • Resolution set to fixed
  • Status changed from new to closed

Couldn't reproduce. However the if statement is fixed with PR ​https://github.com/openmicroscopy/openmicroscopy/pull/3467

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