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Task #12845 (new)

Opened 5 years ago

Last modified 4 years ago

RFE: file type Metamorph

Reported by: jamoore Owned by: jburel
Priority: minor Milestone: Unscheduled
Component: Import Version: 5.1.0
Keywords: n.a. Cc: ux@…, mlinkert
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

https://www.openmicroscopy.org/community/viewtopic.php?f=4&t=7771

In the import module of OMERO.insight 5.1 the file type list for Metamorph files STK is : *.stk, *.nd, *.tif, *.tiff. However, if the user want to select only nd files it's difficult when the number of associated tif files is important. One suggestion is to have a file type Metamorph with only *.nd and only *.stk, *.tif file is not necessary.

Change History (6)

comment:1 Changed 5 years ago by jamoore

  • Owner set to jburel

Something we can do for 5.1.2 or push?

comment:2 Changed 5 years ago by jburel

  • Cc mlinkert added

The list of filters used in insight is coming from bio-formats
Possible to add a new entry.
Preferences where we want it?

Last edited 5 years ago by jburel (previous) (diff)

comment:3 Changed 5 years ago by jamoore

Looks like we'd either have to tear this into 2 readers or invert the logic so each reader has the chance of defining multiple FileFilters, no?

  public MetamorphReader() {
    super("Metamorph STK", new String[] {"stk", "nd", "tif", "tiff"});

Either looks to be too large for 5.1.2. Any other ideas, Melissa?

comment:4 Changed 5 years ago by mlinkert

One option would be to create a separate FileFilter? for each extension coming from a reader (loci.formats.gui.GUITools lines 102-104); that's easy enough to implement, but is likely to be kind of unwieldy.

Do we really need this though? Typing "*.nd" in the "Selection" box seems to have the desired effect; I think we're going to be hard-pressed to come up with something nicer and more flexible than that.

comment:5 Changed 4 years ago by jamoore

  • Milestone changed from 5.1.4 to OMERO-5.1.4

Splitting 5.1.4 due to milestone decoupling

comment:6 Changed 4 years ago by jamoore

  • Milestone changed from 5.x to Unscheduled
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