Task #12893 (closed)
Bug: fix reading of compressed B & H FIFO files
| Reported by: | omero-qa | Owned by: | mlinkert |
|---|---|---|---|
| Priority: | minor | Milestone: | B-F-5.1.4 |
| Component: | Bio-Formats | Version: | 5.1.1 |
| Keywords: | SDTReader | Cc: | i.munro@…, sbesson |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | 0.0d |
| Sprint: | n.a. |
Description
https://www.openmicroscopy.org/qa2/qa2/qa/feedback/11079/
Comment: A user has reported that FLIMfit cannot open compressed Becker & Hickl FIFO .sdt files.
Uncompressed FIFO files are fine.
Attached is an example of the sane data in both formats.
Reproduced using Bio-Formats 5.1.1. While the reader initialization completes without error for both files, the bytes returned by openBytes are incorrect for compressed FIFO files.
Change History (5)
comment:1 Changed 9 years ago by sbesson
- Cc sbesson added
- Component changed from from QA to Bio-Formats
- Keywords SDTReader added
comment:2 Changed 9 years ago by mlinkert
- Milestone changed from Unscheduled to 5.1.4
- Owner changed from mlinkert-x to mlinkert
comment:3 Changed 9 years ago by mlinkert
- Resolution set to fixed
- Status changed from new to closed
comment:4 Changed 9 years ago by Melissa Linkert <melissa@…>
- Remaining Time set to 0
(In [30c1fed95a599d30c7eb4b19d532e8133e7aa0a5/bioformats.git] on branch develop) SDT: add support for Zip-compressed data
Fixes #12893.
comment:5 Changed 9 years ago by jamoore
- Milestone changed from 5.1.4 to B-F-5.1.4
Splitting 5.1.4 due to milestone decoupling
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PR open: https://github.com/openmicroscopy/bioformats/pull/1950