Task #13005 (closed)
BUG: Ellipse not visible
Reported by: | pwalczysko | Owned by: | jburel |
---|---|---|---|
Priority: | major | Milestone: | OMERO-5.2.0 |
Component: | Insight | Version: | OMERO-5.1.3 |
Keywords: | n.a. | Cc: | ux@… |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | n.a. |
Sprint: | n.a. |
Description
In ImageJ 5.1.3 release BF.
- open an image from OMERO
- draw an ellipse on it and add to Overlay
- Save ROI(s) to OMERO
- open an Insight and navigate to the image, open it and check ROIs
- there is one ellipse region listed as expected, but when you click onto the shape, just the border markers are visible in the image, not the ellipse itself.
- Works fine with rectangle.
Attachments (2)
Change History (10)
Changed 9 years ago by pwalczysko
Changed 9 years ago by pwalczysko
comment:1 Changed 9 years ago by pwalczysko
comment:2 Changed 9 years ago by pwalczysko
This is an overlay specific issue. The ROI Manager ellipse workflow works as expected. Also, the mulit-z quiality of the image seems to be important (i.e. multi-z and Overlay shows the bug).
comment:3 Changed 9 years ago by pwalczysko
- Priority changed from major to minor
comment:4 Changed 9 years ago by jamoore
- Milestone changed from 5.1.4 to OMERO-5.1.4
Splitting 5.1.4 due to milestone decoupling
comment:5 Changed 8 years ago by jburel
- Milestone changed from 5.x to OMERO-5.2.0
- Priority changed from minor to major
Need to check if we can handle cases with no z or no t set in the measurement tool.
comment:6 Changed 8 years ago by jburel
- Milestone changed from OMERO-5.2.0 to 5.x
Moving to 5.x since this might create unknown issue in MT.
The tool was not designed at the time with such case in mind.
comment:7 Changed 8 years ago by jamoore
- Milestone changed from 5.x to OMERO-5.2.0
- Resolution set to duplicate
- Status changed from new to closed
Since we don't yet have a 5.3/6.0 milestone, I'm migrating this to https://trello.com/c/lNZrNkNE/57-bug-ellipse-not-visible
comment:8 Changed 8 years ago by pwalczysko
As checked today, works with updated Fiji (BF 5.1.7 release 4 Dec) and OMERO-ij plugin from today merge build OMERO.insight-ij-5.2.1-161-7429e47-ice35-b206. The ellipse was checked also from todays merge build of insight, OMERO.insight-5.2.1-161-7429e47-ice35-b206-mac. All works as expected.
Note that this seems image specific. The multi-z dv shows the bug. The single-plane tiff DOES NOT show it.