Task #13040 (closed)
Opened 9 years ago
Closed 8 years ago
Bug: cyclic tag sets crash Insight
| Reported by: | mtbcarroll | Owned by: | jburel |
|---|---|---|---|
| Priority: | major | Milestone: | OMERO-5.2.3 |
| Component: | Insight | Version: | OMERO-5.1.3 |
| Keywords: | n.a. | Cc: | ux@… |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
Mutually recursive tag sets crash Insight. Put X in Y and Y and X and look at the tags browser:
java.lang.Exception: Abnormal termination due to an uncaught exception. java.lang.StackOverflowError at java.util.HashMap.addEntry(HashMap.java:884) at java.util.HashMap.put(HashMap.java:505) at java.util.HashSet.add(HashSet.java:217) at pojos.TagAnnotationData.getTags(TagAnnotationData.java:191) at org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:222) at org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:227) at org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:227) at org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:227) at ... many repeats ... org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:227) at org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:227) at org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:227) at org.openmicroscopy.shoola.agents.util.browser.TreeViewerTranslator.transformTag(TreeViewerTranslator.java:227) Exception in thread "AWT-EventQueue-0" at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.showErrorDialog(UserNotifierImpl.java:191) at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:291) at org.openmicroscopy.shoola.env.AbnormalExitHandler.doTermination(AbnormalExitHandler.java:147) at org.openmicroscopy.shoola.env.AbnormalExitHandler.terminate(AbnormalExitHandler.java:85) at org.openmicroscopy.shoola.env.RootThreadGroup.uncaughtException(RootThreadGroup.java:69) at java.awt.EventDispatchThread.processException(EventDispatchThread.java:264) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:256) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138) at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)
Change History (4)
comment:1 Changed 8 years ago by jamoore
- Milestone changed from 5.x to Unscheduled
comment:2 Changed 8 years ago by dlindner
comment:3 Changed 8 years ago by mtbcarroll
It does, e.g.,
bin/omero obj new AnnotationAnnotationLink parent=TagAnnotation:1234 child=TagAnnotation:5678
It could also be created by a buggy analysis script.
comment:4 Changed 8 years ago by jburel
- Milestone changed from Unscheduled to OMERO-5.2.3
- Resolution set to fixed
- Status changed from new to closed
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Is this still relevant? Couldn't find a way to put a tagset into a tagset, neither Insight nor web allows that. Does the command line?