Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #13082 (closed)

Opened 8 years ago

Closed 7 years ago

Add support for Olympus OIR format

Reported by: sbesson Owned by:
Priority: major Milestone: Unscheduled
Component: Bio-Formats Version: OMERO-5.1.3
Keywords: new-format, external Cc: bf@…, john.lim@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description (last modified by bramalingam)

See ​https://www.openmicroscopy.org/community/viewtopic.php?f=13&t=7918 and ​https://www.openmicroscopy.org/qa2/qa/feedback/16871/
and ​https://www.openmicroscopy.org/qa2/qa/feedback/17270/
and ​https://www.openmicroscopy.org/qa2/qa/feedback/17293/

Change History (17)

comment:2 Changed 8 years ago by sbesson

Additional samples files uploaded at ​https://www.openmicroscopy.org/qa2/qa/feedback/16881/

comment:3 Changed 8 years ago by sbesson

Additional samples files uploaded at ​https://www.openmicroscopy.org/qa2/qa/feedback/17016/

comment:4 Changed 8 years ago by mlinkert

  • Keywords new-format added
  • Owner mlinkert deleted

comment:5 Changed 8 years ago by jamoore

Forum user Lachie commented in ​https://www.openmicroscopy.org/community/viewtopic.php?f=13&t=7918 to say:

Sorry for bumping this thread again but in case it helps anyone, there is an Olympus plugin for imageJ that will allow reading of oir files. ​http://imagej.net/OlympusImageJPlugin

comment:6 Changed 8 years ago by bramalingam

  • Description modified (diff)

additional sample files uploaded at : ​https://www.openmicroscopy.org/qa2/qa/feedback/17222/ and
​https://www.openmicroscopy.org/qa2/qa/feedback/17221/

comment:7 Changed 8 years ago by bramalingam

additional sample files uploaded at : ​https://www.openmicroscopy.org/qa2/qa/feedback/17270/

Last edited 8 years ago by bramalingam (previous) (diff)

comment:8 Changed 8 years ago by bramalingam

  • Description modified (diff)

comment:9 Changed 8 years ago by bramalingam

  • Description modified (diff)

comment:10 Changed 8 years ago by bramalingam

  • Description modified (diff)

comment:11 Changed 8 years ago by mtbcarroll

  • Cc john.lim@… added
  • Keywords external added
  • Priority changed from minor to major

Additional sample file at ​https://www.openmicroscopy.org/qa2/qa/feedback/17331/.

comment:12 Changed 8 years ago by mtbcarroll

  • Cc bf@… added

comment:13 Changed 8 years ago by bramalingam

Additional sample file at ​https://www.openmicroscopy.org/qa2/qa/feedback/17335/

comment:17 Changed 7 years ago by sbesson

  • Resolution set to fixed
  • Status changed from new to closed

Support for Olympus OIR has been added in Bio-Formats 5.5.0 thanks to a partnership between between Glencoe Software and OLYMPUS EUROPA SE & Co. KG. Closing this ticket.

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.67332 sec.)

© 2000-2014 University of Dundee & Open Microscopy Environment. Creative Commons Attribution 3.0 Unported License
OME source code is available under the GNU General public license or through commercial license from Glencoe Software

We're Hiring!