Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #13143 (closed)

Opened 8 years ago

Closed 8 years ago

BUG: OMERO.server install failure

Reported by: rkferguson Owned by:
Priority: major Milestone: Unscheduled
Component: General Version: OMERO-5.2.0
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

Mac OS 10.11.2 - El Capitan

After correcting the open ssl error ran into this failure:

==> Downloading http://downloads.openmicroscopy.org/omero/5.2.1/artifacts/openmicroscopy-5.2.1.zip
######################################################################## 100.0%
==> ./build.py -Dice.home=/usr/local/opt/zeroc-ice35 build-all
Last 15 lines from /Users/gus/Library/Logs/Homebrew/omero52/01.build.py:
  CMake will not be able to correctly generate this project.
Call Stack (most recent call first):
  CMakeLists.txt:46 (project)
-- Configuring incomplete, errors occurred!
See also "/tmp/omero5220160120-72175-q3kwnf/openmicroscopy-5.2.1/components/tools/OmeroCpp/cppbuild/CMakeFiles/CMakeOutput.log".
See also "/tmp/omero5220160120-72175-q3kwnf/openmicroscopy-5.2.1/components/tools/OmeroCpp/cppbuild/CMakeFiles/CMakeError.log".

BUILD FAILED
/private/tmp/omero5220160120-72175-q3kwnf/openmicroscopy-5.2.1/build.xml:189: The following error occurred while executing this line:
/private/tmp/omero5220160120-72175-q3kwnf/openmicroscopy-5.2.1/components/antlib/resources/global.xml:430: The following error occurred while executing this line:
/private/tmp/omero5220160120-72175-q3kwnf/openmicroscopy-5.2.1/components/tools/build.xml:28: The following error occurred while executing this line:
/private/tmp/omero5220160120-72175-q3kwnf/openmicroscopy-5.2.1/components/antlib/resources/global.xml:430: The following error occurred while executing this line:
/private/tmp/omero5220160120-72175-q3kwnf/openmicroscopy-5.2.1/components/tools/OmeroCpp/build.xml:24: exec returned: 1

Total time: 6 minutes 45 seconds

Attachments (1)

01.build.py (710.1 KB) - added by rkferguson 8 years ago.

Download all attachments as: .zip

Change History (4)

Changed 8 years ago by rkferguson

comment:1 Changed 8 years ago by rkferguson

/Users/gus/Library/Logs/Homebrew/omero52/01.build.py attached.

comment:2 Changed 8 years ago by rkferguson

Tried with just

$ brew install omero

Still failed with error:

{{{ls25532:~ gus$ brew install omero
==> Installing omero from ome/alt
==> Using Homebrew-provided fortran compiler.
This may be changed by setting the FC environment variable.
==> Downloading http://downloads.openmicroscopy.org/omero/5.2.1/artifacts/openmicroscopy-5.2.1.zi
######################################################################## 100.0%
==> ./build.py -Dice.home=/usr/local/opt/zeroc-ice35 build-default
Last 15 lines from /Users/gus/Library/Logs/Homebrew/omero/01.build.py:

File "/private/tmp/omero20160126-8097-1yblu3u/openmicroscopy-5.2.1/components/tools/OmeroFS/setup.py", line 20, in <module>

from ez_setup import use_setuptools

File "/private/tmp/omero20160126-8097-1yblu3u/openmicroscopy-5.2.1/components/tools/OmeroFS/ez_setup.py", line 72, in <module>

from md5 import md5

File "/usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/md5.py", line 10, in <module>

from hashlib import md5

ImportError?: cannot import name md5

BUILD FAILED
/private/tmp/omero20160126-8097-1yblu3u/openmicroscopy-5.2.1/build.xml:179: The following error occurred while executing this line:
/private/tmp/omero20160126-8097-1yblu3u/openmicroscopy-5.2.1/components/antlib/resources/global.xml:430: The following error occurred while executing this line:
/private/tmp/omero20160126-8097-1yblu3u/openmicroscopy-5.2.1/components/tools/python.xml:36: The following error occurred while executing this line:
/private/tmp/omero20160126-8097-1yblu3u/openmicroscopy-5.2.1/components/antlib/resources/global.xml:591: exec returned: 1

Total time: 4 minutes 0 seconds}}}

comment:3 Changed 8 years ago by jburel

  • Resolution set to fixed
  • Status changed from new to closed

Closing
Problem was not longer there after re-installing python via homebrew

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.66065 sec.)

We're Hiring!