Task #13179 (closed)
Opened 8 years ago
Closed 8 years ago
BUG: NativeND2Reader (parsing text for the emission wavelengths)
| Reported by: | bramalingam | Owned by: | bramalingam |
|---|---|---|---|
| Priority: | minor | Milestone: | B-F-5.2.0 |
| Component: | Bio-Formats | Version: | BIo-Formats-5.1.5 |
| Keywords: | n.a. | Cc: | aryeh@…, Reinat.Nevo@… |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
ref:
QA17099
http://lists.openmicroscopy.org.uk/pipermail/ome-users/2016-March/005907.html
Exception seen in Bio-Formats 5.1.8(FIJI)
(Fiji Is Just) ImageJ 2.0.0-rc-43/1.50g; Java 1.8.0_60 [64-bit]; Mac OS X 10.9.5; 106MB of 6797MB (1%)
java.lang.StringIndexOutOfBoundsException?: String index out of range: -6
at java.lang.String.substring(String.java:1967)
at loci.formats.in.NativeND2Reader.parseText(NativeND2Reader.java:2239)
at loci.formats.in.NativeND2Reader.initFile(NativeND2Reader.java:748)
at loci.formats.FormatReader?.setId(FormatReader?.java:1426)
at loci.formats.DelegateReader?.setId(DelegateReader?.java:290)
at loci.plugins.in.ImportProcess?.initializeFile(ImportProcess?.java:505)
at loci.plugins.in.ImportProcess?.execute(ImportProcess?.java:143)
at loci.plugins.in.Importer.showDialogs(Importer.java:140)
at loci.plugins.in.Importer.run(Importer.java:76)
at loci.plugins.LociImporter?.run(LociImporter?.java:78)
at ij.IJ.runUserPlugIn(IJ.java:212)
at ij.IJ.runPlugIn(IJ.java:176)
at ij.Executer.runCommand(Executer.java:137)
at ij.Executer.run(Executer.java:66)
at java.lang.Thread.run(Thread.java:745)
Change History (3)
comment:1 Changed 8 years ago by bramalingam
- Cc Reinat.Nevo@… added
comment:2 Changed 8 years ago by bramalingam
comment:3 Changed 8 years ago by sbesson
- Resolution set to fixed
- Status changed from new to closed
https://github.com/openmicroscopy/bioformats/pull/2290