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Task #13179 (closed)

Opened 6 years ago

Closed 5 years ago

BUG: NativeND2Reader (parsing text for the emission wavelengths)

Reported by: bramalingam Owned by: bramalingam
Priority: minor Milestone: B-F-5.2.0
Component: Bio-Formats Version: BIo-Formats-5.1.5
Keywords: n.a. Cc: aryeh@…, Reinat.Nevo@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

ref:
QA17099
http://lists.openmicroscopy.org.uk/pipermail/ome-users/2016-March/005907.html

Exception seen in Bio-Formats 5.1.8(FIJI)
(Fiji Is Just) ImageJ 2.0.0-rc-43/1.50g; Java 1.8.0_60 [64-bit]; Mac OS X 10.9.5; 106MB of 6797MB (1%)

java.lang.StringIndexOutOfBoundsException?: String index out of range: -6

at java.lang.String.substring(String.java:1967)
at loci.formats.in.NativeND2Reader.parseText(NativeND2Reader.java:2239)
at loci.formats.in.NativeND2Reader.initFile(NativeND2Reader.java:748)
at loci.formats.FormatReader?.setId(FormatReader?.java:1426)
at loci.formats.DelegateReader?.setId(DelegateReader?.java:290)
at loci.plugins.in.ImportProcess?.initializeFile(ImportProcess?.java:505)
at loci.plugins.in.ImportProcess?.execute(ImportProcess?.java:143)
at loci.plugins.in.Importer.showDialogs(Importer.java:140)
at loci.plugins.in.Importer.run(Importer.java:76)
at loci.plugins.LociImporter?.run(LociImporter?.java:78)
at ij.IJ.runUserPlugIn(IJ.java:212)
at ij.IJ.runPlugIn(IJ.java:176)
at ij.Executer.runCommand(Executer.java:137)
at ij.Executer.run(Executer.java:66)
at java.lang.Thread.run(Thread.java:745)

Change History (3)

comment:1 Changed 6 years ago by bramalingam

  • Cc Reinat.Nevo@… added

comment:3 Changed 5 years ago by sbesson

  • Resolution set to fixed
  • Status changed from new to closed
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