Task #13239 (closed)
Opened 8 years ago
Closed 8 years ago
BUG: CZI Invalid C Index
| Reported by: | bramalingam | Owned by: | bramalingam |
|---|---|---|---|
| Priority: | minor | Milestone: | Unscheduled |
| Component: | Bio-Formats | Version: | Bio-Formats-5.1.8 |
| Keywords: | n.a. | Cc: | rac2017@… |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
Ref: QA 17192
http://lists.openmicroscopy.org.uk/pipermail/ome-users/2016-May/006030.html
Testing Results:
File: Conv 2 3 colors.czi
BF : 5.1.9
(Fiji Is Just) ImageJ 2.0.0-rc-43/1.51a; Java 1.8.0_60 [64-bit]; Mac OS X 10.9.5; 53MB of 9837MB (<1%)
java.lang.IllegalArgumentException?: Invalid C index: 1/1
at loci.formats.FormatTools?.getIndex(FormatTools?.java:413)
at loci.formats.FormatTools?.getIndex(FormatTools?.java:340)
at loci.formats.FormatReader?.getIndex(FormatReader?.java:1113)
at loci.formats.in.ZeissCZIReader.assignPlaneIndices(ZeissCZIReader.java:1296)
at loci.formats.in.ZeissCZIReader.initFile(ZeissCZIReader.java:773)
at loci.formats.FormatReader?.setId(FormatReader?.java:1426)
at loci.plugins.in.ImportProcess?.initializeFile(ImportProcess?.java:505)
at loci.plugins.in.ImportProcess?.execute(ImportProcess?.java:143)
at loci.plugins.in.Importer.showDialogs(Importer.java:140)
at loci.plugins.in.Importer.run(Importer.java:76)
at loci.plugins.LociImporter?.run(LociImporter?.java:78)
at ij.IJ.runUserPlugIn(IJ.java:216)
at ij.IJ.runPlugIn(IJ.java:180)
at ij.Executer.runCommand(Executer.java:137)
at ij.Executer.run(Executer.java:66)
at java.lang.Thread.run(Thread.java:745)
Change History (3)
comment:1 Changed 8 years ago by dgault
comment:2 Changed 8 years ago by bramalingam
comment:3 Changed 8 years ago by bramalingam
- Resolution set to fixed
- Status changed from new to closed
Same issue has again been reported via ome-users - http://lists.openmicroscopy.org.uk/pipermail/ome-users/2016-August/006143.html
Additional QA file can be found for reproducing: QA-17325