Bug #13324 (new)
Opened 8 years ago
bfconvert: Errors using -range option with CZI files
Reported by: | dgault | Owned by: | dgault |
---|---|---|---|
Priority: | major | Cc: | Tjelvar.Olsson@… |
Sprint: | n.a. | ||
Total Remaining Time: | n.a. |
Description
Issue raised by user on mailing list: http://lists.openmicroscopy.org.uk/pipermail/ome-devel/2017-February/003902.html
Converting from a czi file using the -range option shows a number of issues:
- For multi channel on a single channel is converted
- Specifying the channel with -channel returns no output but without error
Also I have produced some odd looking behaviour with it converting negative planes and percentages thats results in an invalid OME-TIFF
[Zeiss CZI] -> test.ome.tiff [OME-TIFF]
Converted -46/49 planes (-93%)
Converted -41/49 planes (-83%)
Converted -36/49 planes (-73%)
Converted -31/49 planes (-63%)
Converted -26/49 planes (-53%)
Converted -21/49 planes (-42%)
Converted -16/49 planes (-32%)
Converted -11/49 planes (-22%)
Converted -6/49 planes (-12%)
Converted -2/49 planes (-4%)
Converted 1/49 planes (2%)