Bug #1542 (closed)
Opened 15 years ago
Closed 15 years ago
import gets stuck in "prepping" stage
Reported by: | jamoore | Owned by: | bwzloranger |
---|---|---|---|
Priority: | blocker | Cc: | jrswedlow, jburel |
Sprint: | n.a. | ||
Total Remaining Time: | n.a. |
Description (last modified by jmoore)
For about 10 minutes I've been in the "prepping" stage. Checked thread dump, no activity.
From log:
2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - omero.model.Well:0:0 == omero.model.WellI@3865db85,omero.model.Well:0:0 2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - omero.model.WellSample:0:0:0 == omero.model.WellSampleI@438e9e9,omero.model.WellSample:0:0:0 2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Starting references.... 2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - omero.model.Plate:0 == omero.model.ScreenI:1 2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Image:0 == Instrument:0 2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Image:0 == omero.model.FileAnnotation:0:0 2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - omero.model.FileAnnotation:0:0 == omero.model.OriginalFile:0 2009-10-11 20:30:45,233 324189 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - omero.model.WellSample:0:0:0 == Image:0 2009-10-11 20:30:45,249 324205 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - containerCache contains 13 entries. 2009-10-11 20:30:45,249 324205 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - referenceCache contains 5 entries. 2009-10-11 20:30:45,327 324283 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Saving pixels id: 66 2009-10-11 20:31:26,483 365439 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:32:26,483 425439 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:33:26,499 485455 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:34:26,499 545455 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:35:26,514 605470 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:36:20,749 659705 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Creating root! 2009-10-11 20:36:20,764 659720 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Creating root! 2009-10-11 20:36:21,061 660017 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Creating root! 2009-10-11 20:36:26,514 665470 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:36:31,733 670689 [2-thread-1] WARN ome.formats.OMEROMetadataStoreClient - Duplicate LSID Instrument:0 exists in omero.model.InstrumentI@5986f987,Instrument:0 2009-10-11 20:36:31,733 670689 [2-thread-1] WARN ome.formats.OMEROMetadataStoreClient - Duplicate LSID Instrument:0 exists in omero.model.InstrumentI@5986f987,Instrument:0 2009-10-11 20:36:31,749 670705 [2-thread-1] WARN ome.formats.OMEROMetadataStoreClient - Duplicat ...lots of these... 2009-10-11 20:36:34,124 673080 [2-thread-1] WARN ome.formats.OMEROMetadataStoreClient - Duplicate LSID Instrument:0 exists in omero.model.InstrumentI@5986f987,Instrument:0 2009-10-11 20:36:34,139 673095 [2-thread-1] WARN ome.formats.OMEROMetadataStoreClient - Duplicate LSID Instrument:0 exists in omero.model.InstrumentI@5986f987,Instrument:0 2009-10-11 20:36:55,217 694173 [2-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - Creating root! 2009-10-11 20:37:26,530 725486 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:38:26,530 785486 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:39:26,530 845486 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:40:26,530 905486 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:41:26,546 965502 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:42:26,546 1025502 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:43:26,546 1085502 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:44:26,546 1145502 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:45:26,546 1205502 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping 2009-10-11 20:46:26,561 1265517 [4-thread-1] DEBUG ome.formats.OMEROMetadataStoreClient - KeepAlive ping
Attachments (1)
Change History (5)
comment:1 Changed 15 years ago by jmoore
- Description modified (diff)
comment:2 Changed 15 years ago by jmoore
comment:3 Changed 15 years ago by bwzloranger
Fixed by svn commit r5388
comment:4 Changed 15 years ago by bwzloranger
- Resolution set to fixed
- Status changed from new to closed
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