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Task #1820 (closed)

Opened 14 years ago

Closed 14 years ago

Last modified 14 years ago

Create OME-XML examples

Reported by: ajpatterson Owned by: ajpatterson
Priority: n.a. Milestone: OMERO-Beta4.2
Component: Documentation Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2010-03-19 (5)

Description (last modified by ajpatterson)

Initial List

  • Minimal
  • SA example with sensible data in it
  • Tags from OMERO
  • ROI
  • SPW
  • Multi-File example
  • Metadata only
  • BinaryFile
  • Instrument
  • Dataset/Group/Project?
  • Single Channel
  • Multi Channel
  • Single Z, single T
  • Stack of Z, single T
  • Single Z, multi Time
  • Stack of Z, multi Time
  • Stack of Z, multi Time, multi Channel

Change History (21)

comment:1 Changed 14 years ago by ajpatterson

  • Milestone changed from Unscheduled to OMERO-Beta4.2
  • Sprint set to 2010-02-19 (3)

comment:2 Changed 14 years ago by ajpatterson

  • Status changed from new to assigned

comment:3 Changed 14 years ago by ajpatterson

comment:4 Changed 14 years ago by ajpatterson

  • Description modified (diff)

comment:5 Changed 14 years ago by ajpatterson

comment:6 Changed 14 years ago by ajpatterson

  • Remaining Time set to 2

comment:7 Changed 14 years ago by ajpatterson

Samples I have made so far. All are 2008/09 schema as that is produced by bfconvert but should be easy to update.

  • Single Z, single T, single Channel - 6x4y1z1t1c8b-swatch.ome
  • Single Z, single T, multi Channel - 6x4y1z1t3c8b-swatch.ome
  • Stack of Z, single T, single Channel - 18x24y5z1t1c8b-text.ome
  • Stack of Z, single T, multi Channel - 18x24y5z1t2c8b-text.ome (check)
  • Single Z, multi Time, single Channel - 18x24y1z5t1c8b-text.ome (check)
  • Single Z, multi Time, multi Channel -
  • Stack of Z, multi Time, single Channel - 18x24y5z5t1c8b-text.ome
  • Stack of Z, multi Time, multi Channel - 18x24y5z5t2c8b-text.ome
  • Metadata only - 18x24y5z5t1c8b-metadata.ome (invalid under 2008)

comment:9 Changed 14 years ago by wmoore

  • Sprint changed from 2010-02-19 (3) to 2010-03-05 (4)

comment:10 Changed 14 years ago by ajpatterson

You cannot have a Multi-File example for OME-XML as that support is part of TIffData block

comment:11 Changed 14 years ago by ajpatterson

  • Stack of Z, single T, multi Channel - 18x24y5z1t2c8b-text.ome (ok)
  • Single Z, multi Time, single Channel - 18x24y1z5t1c8b-text.ome (ok)
  • Single Z, multi Time, multi Channel - 18x24y1z5t2c8b-text.ome (ok)

comment:12 Changed 14 years ago by ajpatterson

  • Remaining Time changed from 2 to 1.5

comment:13 Changed 14 years ago by ajpatterson

  • Remaining Time changed from 1.5 to 1

comment:14 Changed 14 years ago by ajpatterson

This is the first try at expressing tags and tagsets in the 2009-09 schema.
http://www.ome-xml.org/browser/Documentation/Samples/OmeFiles/2009-09/6x4y1z1t1c8b-swatch-tagged.ome

comment:15 Changed 14 years ago by ajpatterson

  • Remaining Time changed from 1 to 0.75

comment:16 Changed 14 years ago by ajpatterson

  • Remaining Time changed from 0.75 to 0.5

comment:17 Changed 14 years ago by ajpatterson

Left to do:

  • SA example with sensible data in it
  • ROI
  • Instrument

comment:18 Changed 14 years ago by ajpatterson

  • Remaining Time changed from 0.5 to 0.25

comment:19 Changed 14 years ago by cxallan

  • Sprint changed from 2010-03-05 (4) to 2010-03-19 (5)

comment:20 Changed 14 years ago by ajpatterson

  • Remaining Time changed from 0.25 to 0
  • Resolution set to fixed
  • Status changed from assigned to closed

comment:21 Changed 14 years ago by ajpatterson

  • Component changed from General to Documentation
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