Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #2063 (closed)

Opened 14 years ago

Closed 14 years ago

Last modified 14 years ago

BUG: NPE when setPixelsId() is called on an unreadable Pixels ID

Reported by: cxallan Owned by: cxallan
Priority: n.a. Milestone: OMERO-Beta4.2
Component: n.a. Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2010-03-19 (5)

Description

Problem identified by test case where if a Pixels ID cannot be loaded an NPE is possible during checks for graph criticality.

ome.conditions.InternalException:  Wrapped Exception: (java.lang.NullPointerException):
null
	at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:543)
	at ome.services.ThumbnailCtx.loadAndPrepareRenderingSettings(ThumbnailCtx.java:213)
	at ome.services.ThumbnailCtx.loadAndPrepareRenderingSettings(ThumbnailCtx.java:155)
	at ome.services.ThumbnailBean.setPixelsId(ThumbnailBean.java:253)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:585)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:310)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:182)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:149)
	at ome.security.basic.EventHandler.invoke(EventHandler.java:134)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
	at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:182)
	at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:166)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:106)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
	at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:175)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
	at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:111)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
	at $Proxy101.setPixelsId(Unknown Source)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:585)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:310)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:182)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:149)
	at org.springframework.aop.interceptor.JamonPerformanceMonitorInterceptor.invokeUnderTrace(JamonPerformanceMonitorInterceptor.java:105)
	at org.springframework.aop.interceptor.AbstractTraceInterceptor.invoke(AbstractTraceInterceptor.java:110)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
	at ome.server.itests.LoginInterceptor.invoke(LoginInterceptor.java:35)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
	at $Proxy101.setPixelsId(Unknown Source)
	at ome.services.delete.DeleteServiceTest.testDeleteSettingsAfterViewedByRoot(DeleteServiceTest.java:268)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:585)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:580)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:478)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:617)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:885)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:712)
	at org.testng.TestRunner.privateRun(TestRunner.java:582)
	at org.testng.TestRunner.run(TestRunner.java:477)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:324)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:319)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:292)
	at org.testng.SuiteRunner.run(SuiteRunner.java:198)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:823)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:790)
	at org.testng.TestNG.run(TestNG.java:708)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)

Change History (4)

comment:1 Changed 14 years ago by cxallan

  • Status changed from new to assigned

comment:2 Changed 14 years ago by cxallan

  • Remaining Time set to 0
  • Resolution set to fixed
  • Status changed from assigned to closed

(In [6407]) Resolved an issue that Josh noticed during testing (Fixes #2063) and commented out some superfluous renderAsPackedInt() usage during testing to speed up and stablize some of the rendering / thumbnail test suite.

comment:3 Changed 14 years ago by wmoore

(In [8051]) testSpeedOfThumbnailFigure passes for me locally. Committing to test on hudson. See #2063

comment:4 Changed 14 years ago by wmoore

Sorry, Ignore that preview commit hook! Entered wrong ticket number.

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.68582 sec.)

© 2000-2014 University of Dundee & Open Microscopy Environment. Creative Commons Attribution 3.0 Unported License
OME source code is available under the GNU General public license or through commercial license from Glencoe Software

We're Hiring!