Task #2349 (closed)
Opened 14 years ago
Closed 14 years ago
BUG: ROI Figure
Reported by: | jburel | Owned by: | wmoore |
---|---|---|---|
Priority: | critical | Milestone: | OMERO-Beta4.2 |
Component: | Scripting | Version: | n.a. |
Keywords: | n.a. | Cc: | |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | n.a. |
Sprint: | 2010-05-13 (9) |
Description
Run the ROI figure script on an greyscale image with only one channel
using the UI on the fly
Traceback (most recent call last): File "./script", line 779, in <module> runAsScript() File "./script", line 772, in runAsScript fileAnnotation = roiFigure(session, commandArgs) File "./script", line 696, in roiFigure mergedColours, width, height, imageLabels, spacer, algorithm, stepping, scalebar, overlayColour, roiZoom, roiLabel) File "./script", line 453, in getSplitView stepping, fontsize, showTopLabels) File "./script", line 198, in getROIsplitView merged = re.renderProjectedCompressed(algorithm, tIndex, stepping, proStart, proEnd) File "/Users/jburel/Documents/svn/OMERO/trunk/dist/lib/python/omero_api_RenderingEngine_ice.py", line 183, in renderProjectedCompressed return _M_omero.api.RenderingEngine._op_renderProjectedCompressed.invoke(self, ((algorithm, timepoint, stepping, start, end), _ctx)) omero.ApiUsageException: exception ::omero::ApiUsageException { serverStackTrace = ome.conditions.ApiUsageException: No active channel bindings found. at omeis.providers.re.GreyScaleStrategy.findFirstActiveChannelBinding(GreyScaleStrategy.java:287) at omeis.providers.re.GreyScaleStrategy.renderAsPackedInt(GreyScaleStrategy.java:160) at omeis.providers.re.Renderer.renderAsPackedInt(Renderer.java:479) at ome.services.RenderingBean.renderProjectedAsPackedInt(RenderingBean.java:559) at ome.services.RenderingBean.renderProjectedCompressed(RenderingBean.java:583) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:592) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:111) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) at $Proxy73.renderProjectedCompressed(Unknown Source) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:592) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:83) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:40) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) at $Proxy73.renderProjectedCompressed(Unknown Source) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:592) at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) at ome.services.throttling.Callback.run(Callback.java:56) at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:132) at ome.services.blitz.impl.RenderingEngineI.renderProjectedCompressed_async(RenderingEngineI.java:386) at omero.api._RenderingEngineTie.renderProjectedCompressed_async(_RenderingEngineTie.java:274) at omero.api._RenderingEngineDisp.___renderProjectedCompressed(_RenderingEngineDisp.java:560) at omero.api._RenderingEngineDisp.__dispatch(_RenderingEngineDisp.java:1612) at IceInternal.Incoming.invoke(Incoming.java:159) at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) at Ice.ConnectionI.message(ConnectionI.java:972) at IceInternal.ThreadPool.run(ThreadPool.java:577) at IceInternal.ThreadPool.access$100(ThreadPool.java:12) at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) serverExceptionClass = ome.conditions.ApiUsageException message = No active channel bindings found. }
Change History (3)
comment:1 Changed 14 years ago by wmoore
- Status changed from new to assigned
comment:2 Changed 14 years ago by wmoore
comment:3 Changed 14 years ago by wmoore
- Status changed from assigned to closed
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(In [6961]) Fixing Roi_Figure bug. See #2349