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Task #2408 (closed)

Opened 9 years ago

Closed 9 years ago

BUG: Importing Imaris (ims)

Reported by:	cxallan	Owned by:	cxallan
Priority:	minor	Milestone:	OMERO-Beta4.2
Component:	General	Version:	n.a.
Keywords:	n.a.	Cc:
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	0.0d
Sprint:	2010-05-13 (9)

Description

References

Referenced by:
← User Story (#2361): New Metadata Store

Change History (3)

comment:1 Changed 9 years ago by cxallan

Owner set to cxallan
Status changed from new to assigned

comment:2 Changed 9 years ago by cxallan

Exception during import:

2010-05-19 14:28:32,771 2391466    [2-thread-1] ERROR    ome.formats.importer.gui.ImportHandler  - Generic error while importing image.
java.lang.NullPointerException
	at java.text.SimpleDateFormat.parse(SimpleDateFormat.java:1235)
	at java.text.DateFormat.parse(DateFormat.java:335)
	at ome.formats.OMEROMetadataStoreClient.setImageAcquiredDate(OMEROMetadataStoreClient.java:3998)
	at loci.formats.meta.FilterMetadata.setImageAcquiredDate(FilterMetadata.java:839)
	at loci.formats.in.ImarisTiffReader.initFile(ImarisTiffReader.java:153)
	at loci.formats.FormatReader.setId(FormatReader.java:1012)
	at loci.formats.ImageReader.setId(ImageReader.java:644)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:485)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:177)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:485)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:238)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:485)
	at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:213)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:399)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:340)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:215)
	at ome.formats.importer.gui.ImportHandler.access$1(ImportHandler.java:149)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:207)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPo

comment:3 Changed 9 years ago by cxallan

Remaining Time set to 0
Resolution set to fixed
Status changed from assigned to closed

(In [7053]) Handle "null" acquired dates being passed in. (Fixes #2408)

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