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Task #2409 (closed)

Opened 9 years ago

Closed 9 years ago

Last modified 9 years ago

BUG: Importer deadlock

Reported by: cxallan Owned by: bwzloranger
Priority: critical Milestone: OMERO-Beta4.2
Component: Import Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: 2010-05-13 (9)

Description


Change History (4)

comment:1 Changed 9 years ago by cxallan 

WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
WARN:  Variable Data has a Filter
2010-05-19 14:37:58
Full thread dump Java HotSpot(TM) 64-Bit Server VM (14.3-b01-101 mixed mode):

"Image Animator 3" daemon prio=3 tid=0x0000000104b5d000 nid=0x13c828000 waiting on condition [0x000000013c827000]
   java.lang.Thread.State: TIMED_WAITING (sleeping)
	at java.lang.Thread.sleep(Native Method)
	at sun.awt.image.GifFrame.dispose(GifImageDecoder.java:653)
	at sun.awt.image.GifImageDecoder.readImage(GifImageDecoder.java:441)
	at sun.awt.image.GifImageDecoder.produceImage(GifImageDecoder.java:195)
	at sun.awt.image.InputStreamImageSource.doFetch(InputStreamImageSource.java:246)
	at sun.awt.image.ImageFetcher.fetchloop(ImageFetcher.java:172)
	at sun.awt.image.ImageFetcher.run(ImageFetcher.java:136)

"pool-2-thread-1" prio=5 tid=0x00000001048b2000 nid=0x13b938000 waiting for monitor entry [0x000000013b936000]
   java.lang.Thread.State: BLOCKED (on object monitor)
	at javax.swing.text.DefaultHighlighter$SafeDamager.damageRange(DefaultHighlighter.java:591)
	- waiting to lock <0x000000010a91dd50> (a javax.swing.text.DefaultHighlighter$SafeDamager)
	at javax.swing.text.DefaultHighlighter.safeDamageRange(DefaultHighlighter.java:287)
	at javax.swing.text.DefaultHighlighter.safeDamageRange(DefaultHighlighter.java:296)
	at javax.swing.text.DefaultHighlighter.changeHighlight(DefaultHighlighter.java:214)
	at javax.swing.text.DefaultCaret$Handler.removeUpdate(DefaultCaret.java:1736)
	at javax.swing.text.AbstractDocument.fireRemoveUpdate(AbstractDocument.java:243)
	at javax.swing.text.AbstractDocument.handleRemove(AbstractDocument.java:608)
	at javax.swing.text.AbstractDocument.remove(AbstractDocument.java:576)
	at ome.formats.importer.gui.LogAppender.append(LogAppender.java:100)
	at ome.formats.importer.util.LogAppenderProxy.append(LogAppenderProxy.java:77)
	at org.apache.log4j.AppenderSkeleton.doAppend(AppenderSkeleton.java:230)
	- locked <0x000000010a524dc0> (a ome.formats.importer.util.LogAppenderProxy)
	at org.apache.log4j.helpers.AppenderAttachableImpl.appendLoopOnAppenders(AppenderAttachableImpl.java:65)
	at org.apache.log4j.Category.callAppenders(Category.java:203)
	- locked <0x000000010a524c50> (a org.apache.log4j.spi.RootLogger)
	at org.apache.log4j.Category.forcedLog(Category.java:388)
	at org.apache.log4j.Category.log(Category.java:853)
	at org.apache.commons.logging.impl.Log4JLogger.info(Log4JLogger.java:199)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:432)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:340)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:215)
	at ome.formats.importer.gui.ImportHandler.access$1(ImportHandler.java:149)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:207)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
	at java.lang.Thread.run(Thread.java:637)

"pool-3-thread-1" prio=5 tid=0x0000000104647800 nid=0x13b835000 waiting for monitor entry [0x000000013b834000]
   java.lang.Thread.State: BLOCKED (on object monitor)
	at org.apache.log4j.Category.callAppenders(Category.java:201)
	- waiting to lock <0x000000010a524c50> (a org.apache.log4j.spi.RootLogger)
	at org.apache.log4j.Category.forcedLog(Category.java:388)
	at org.apache.log4j.Category.log(Category.java:853)
	at org.apache.commons.logging.impl.Log4JLogger.debug(Log4JLogger.java:177)
	at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:523)
	at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:69)
	- locked <0x000000010a6fed50> (a ome.formats.OMEROMetadataStoreClient)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
	at java.util.concurrent.FutureTask$Sync.innerRunAndReset(FutureTask.java:317)
	at java.util.concurrent.FutureTask.runAndReset(FutureTask.java:150)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$101(ScheduledThreadPoolExecutor.java:98)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.runPeriodic(ScheduledThreadPoolExecutor.java:181)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:205)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
	at java.lang.Thread.run(Thread.java:637)

"Ice.Timer" prio=6 tid=0x0000000121026800 nid=0x13b732000 in Object.wait() [0x000000013b731000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.Timer.run(Timer.java:177)
	- locked <0x000000010a6eb090> (a IceInternal.Timer)

"Ice.SelectorThread" prio=6 tid=0x0000000121237000 nid=0x13b62f000 runnable [0x000000013b62e000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a9cd1f8> (a sun.nio.ch.Util$1)
	- locked <0x000000010a9cd1e0> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a9e1748> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.SelectorThread.run(SelectorThread.java:120)
	at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273)

"Ice.ThreadPool.Client-0" prio=6 tid=0x00000001049dd800 nid=0x13b52c000 runnable [0x000000013b52b000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a9e4c88> (a sun.nio.ch.Util$1)
	- locked <0x000000010a9e4c70> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a9e18b0> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Ice.EndpointHostResolverThread" prio=6 tid=0x0000000104139800 nid=0x13b429000 in Object.wait() [0x000000013b428000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.EndpointHostResolver.run(EndpointHostResolver.java:77)
	- locked <0x000000010a9e55e8> (a IceInternal.EndpointHostResolver)
	at IceInternal.EndpointHostResolver$HelperThread.run(EndpointHostResolver.java:146)

"omero.ClientCallback.ThreadPool-4" prio=6 tid=0x0000000104139000 nid=0x13b326000 in Object.wait() [0x000000013b325000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a9e0388> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-3" prio=6 tid=0x00000001049db000 nid=0x13b223000 in Object.wait() [0x000000013b222000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a9e0388> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-2" prio=6 tid=0x0000000104138000 nid=0x13b120000 runnable [0x000000013b11f000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a9ee728> (a sun.nio.ch.Util$1)
	- locked <0x000000010a9ee710> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a9e1a18> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-1" prio=6 tid=0x00000001046b5000 nid=0x13b01d000 in Object.wait() [0x000000013b01c000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a9e0388> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-0" prio=6 tid=0x00000001046b4000 nid=0x13af1a000 in Object.wait() [0x000000013af19000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a9e0388> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Ice.Timer" prio=6 tid=0x0000000104642800 nid=0x13ae17000 in Object.wait() [0x000000013ae16000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.Timer.run(Timer.java:177)
	- locked <0x000000010a6aaf28> (a IceInternal.Timer)

"Ice.SelectorThread" prio=6 tid=0x00000001041b0800 nid=0x13ad14000 runnable [0x000000013ad13000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a96aa40> (a sun.nio.ch.Util$1)
	- locked <0x000000010a96aa58> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a864330> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.SelectorThread.run(SelectorThread.java:120)
	at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273)

"Ice.ThreadPool.Client-0" prio=6 tid=0x00000001041ae800 nid=0x13ac11000 runnable [0x000000013ac10000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a96aa70> (a sun.nio.ch.Util$1)
	- locked <0x000000010a96aa88> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a8643a8> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Ice.EndpointHostResolverThread" prio=6 tid=0x0000000121236000 nid=0x13ab0e000 in Object.wait() [0x000000013ab0d000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.EndpointHostResolver.run(EndpointHostResolver.java:77)
	- locked <0x000000010a96cf60> (a IceInternal.EndpointHostResolver)
	at IceInternal.EndpointHostResolver$HelperThread.run(EndpointHostResolver.java:146)

"omero.ClientCallback.ThreadPool-4" prio=6 tid=0x0000000121235000 nid=0x13aa0b000 in Object.wait() [0x000000013aa0a000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a941028> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-3" prio=6 tid=0x00000001049d6800 nid=0x13a908000 in Object.wait() [0x000000013a907000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a941028> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-2" prio=6 tid=0x00000001041ac000 nid=0x13a805000 in Object.wait() [0x000000013a804000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a941028> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-1" prio=6 tid=0x00000001041ab800 nid=0x13a702000 runnable [0x000000013a701000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a96aaa0> (a sun.nio.ch.Util$1)
	- locked <0x000000010a96aab8> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a864420> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-0" prio=6 tid=0x000000010423d000 nid=0x13a5ff000 in Object.wait() [0x000000013a5fe000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:710)
	- locked <0x000000010a941028> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Ice.Timer" prio=6 tid=0x000000010423c800 nid=0x13a3f9000 in Object.wait() [0x000000013a3f8000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.Timer.run(Timer.java:177)
	- locked <0x000000010a90e610> (a IceInternal.Timer)

"Ice.SelectorThread" prio=6 tid=0x000000010423b800 nid=0x13a2f6000 runnable [0x000000013a2f5000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a9726d8> (a sun.nio.ch.Util$1)
	- locked <0x000000010a9726f0> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a6a63d0> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.SelectorThread.run(SelectorThread.java:120)
	at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273)

"Ice.ThreadPool.Client-0" prio=6 tid=0x0000000104239800 nid=0x13a1f3000 runnable [0x000000013a1f2000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a972708> (a sun.nio.ch.Util$1)
	- locked <0x000000010a972720> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a6a6448> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Ice.EndpointHostResolverThread" prio=6 tid=0x0000000104a7b000 nid=0x13a0f0000 in Object.wait() [0x000000013a0ef000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.EndpointHostResolver.run(EndpointHostResolver.java:77)
	- locked <0x000000010a971dd8> (a IceInternal.EndpointHostResolver)
	at IceInternal.EndpointHostResolver$HelperThread.run(EndpointHostResolver.java:146)

"omero.ClientCallback.ThreadPool-4" prio=6 tid=0x0000000104aed800 nid=0x139fed000 in Object.wait() [0x0000000139fec000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973878> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-3" prio=6 tid=0x00000001028b5800 nid=0x139eea000 in Object.wait() [0x0000000139ee9000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973878> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-2" prio=6 tid=0x00000001044cc800 nid=0x139ab1000 in Object.wait() [0x0000000139ab0000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973878> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-1" prio=6 tid=0x00000001040f3800 nid=0x135c59000 in Object.wait() [0x0000000135c58000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973878> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-0" prio=6 tid=0x00000001041b2800 nid=0x13540b000 runnable [0x000000013540a000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a972738> (a sun.nio.ch.Util$1)
	- locked <0x000000010a972750> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a6a6790> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Ice.Timer" prio=6 tid=0x0000000104cac000 nid=0x139de7000 in Object.wait() [0x0000000139de6000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.Timer.run(Timer.java:177)
	- locked <0x000000010a90e6e0> (a IceInternal.Timer)

"Ice.SelectorThread" prio=6 tid=0x0000000102948000 nid=0x139ce4000 runnable [0x0000000139ce3000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a983018> (a sun.nio.ch.Util$1)
	- locked <0x000000010a983258> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a6a6880> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.SelectorThread.run(SelectorThread.java:120)
	at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273)

"Ice.ThreadPool.Client-0" prio=6 tid=0x000000010295c800 nid=0x139be1000 runnable [0x0000000139be0000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a9832e8> (a sun.nio.ch.Util$1)
	- locked <0x000000010a987638> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a6a69e8> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"Ice.EndpointHostResolverThread" prio=6 tid=0x00000001211b8800 nid=0x1398a0000 in Object.wait() [0x000000013989f000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.EndpointHostResolver.run(EndpointHostResolver.java:77)
	- locked <0x000000010a982370> (a IceInternal.EndpointHostResolver)
	at IceInternal.EndpointHostResolver$HelperThread.run(EndpointHostResolver.java:146)

"omero.ClientCallback.ThreadPool-4" prio=6 tid=0x00000001211b5800 nid=0x13979d000 runnable [0x000000013979c000]
   java.lang.Thread.State: RUNNABLE
	at sun.nio.ch.KQueueArrayWrapper.kevent0(Native Method)
	at sun.nio.ch.KQueueArrayWrapper.poll(KQueueArrayWrapper.java:136)
	at sun.nio.ch.KQueueSelectorImpl.doSelect(KQueueSelectorImpl.java:69)
	at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:69)
	- locked <0x000000010a987758> (a sun.nio.ch.Util$1)
	- locked <0x000000010a987980> (a java.util.Collections$UnmodifiableSet)
	- locked <0x000000010a6a6b50> (a sun.nio.ch.KQueueSelectorImpl)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:80)
	at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:84)
	at IceInternal.Selector.select(Selector.java:139)
	at IceInternal.ThreadPool.run(ThreadPool.java:335)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-3" prio=6 tid=0x00000001211b5000 nid=0x13969a000 in Object.wait() [0x0000000139699000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973958> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-2" prio=6 tid=0x00000001211b4000 nid=0x136fbd000 in Object.wait() [0x0000000136fbc000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973958> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-1" prio=6 tid=0x00000001211b3800 nid=0x136eba000 in Object.wait() [0x0000000136eb9000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973958> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"omero.ClientCallback.ThreadPool-0" prio=6 tid=0x000000012102d000 nid=0x136db7000 in Object.wait() [0x0000000136db6000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at IceInternal.ThreadPool.run(ThreadPool.java:315)
	- locked <0x000000010a973958> (a IceInternal.ThreadPool)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

"DestroyJavaVM" prio=5 tid=0x0000000104800000 nid=0x100501000 waiting on condition [0x0000000000000000]
   java.lang.Thread.State: RUNNABLE

"TimerQueue" daemon prio=5 tid=0x0000000104191800 nid=0x1358a0000 in Object.wait() [0x000000013589f000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at javax.swing.TimerQueue.run(TimerQueue.java:232)
	- locked <0x000000010a15d400> (a javax.swing.TimerQueue)
	at java.lang.Thread.run(Thread.java:637)

"AWT-EventQueue-0" prio=6 tid=0x00000001210c7000 nid=0x13579d000 in Object.wait() [0x000000013579c000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at javax.swing.text.AbstractDocument.readLock(AbstractDocument.java:1372)
	- locked <0x000000010a6ba400> (a javax.swing.text.DefaultStyledDocument)
	at javax.swing.plaf.basic.BasicTextUI.damageRange(BasicTextUI.java:1155)
	at javax.swing.plaf.basic.BasicTextUI.damageRange(BasicTextUI.java:1138)
	at javax.swing.text.DefaultHighlighter$SafeDamager.run(DefaultHighlighter.java:567)
	- locked <0x000000010a91dd50> (a javax.swing.text.DefaultHighlighter$SafeDamager)
	at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:633)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)

"AWT-Shutdown" prio=5 tid=0x00000001210c6000 nid=0x13569a000 in Object.wait() [0x0000000135699000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at sun.awt.AWTAutoShutdown.run(AWTAutoShutdown.java:259)
	- locked <0x000000010a51ee50> (a java.lang.Object)
	at java.lang.Thread.run(Thread.java:637)

"Java2D Disposer" daemon prio=10 tid=0x000000010288d800 nid=0x135597000 in Object.wait() [0x0000000135596000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118)
	- locked <0x000000010a521b78> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134)
	at sun.java2d.Disposer.run(Disposer.java:125)
	at java.lang.Thread.run(Thread.java:637)

"Timer-0" daemon prio=5 tid=0x00000001210a3000 nid=0x13508e000 in Object.wait() [0x000000013508d000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at java.util.TimerThread.mainLoop(Timer.java:483)
	- locked <0x000000010a520ca8> (a java.util.TaskQueue)
	at java.util.TimerThread.run(Timer.java:462)

"AWT-AppKit" daemon prio=5 tid=0x000000010413c800 nid=0x7fff710cebe0 runnable [0x0000000000000000]
   java.lang.Thread.State: RUNNABLE

"Low Memory Detector" daemon prio=5 tid=0x0000000121003000 nid=0x121a04000 runnable [0x0000000000000000]
   java.lang.Thread.State: RUNNABLE

"CompilerThread1" daemon prio=9 tid=0x0000000121002800 nid=0x121901000 waiting on condition [0x0000000000000000]
   java.lang.Thread.State: RUNNABLE

"CompilerThread0" daemon prio=9 tid=0x0000000121001800 nid=0x120f07000 waiting on condition [0x0000000000000000]
   java.lang.Thread.State: RUNNABLE

"Signal Dispatcher" daemon prio=9 tid=0x0000000121001000 nid=0x120e04000 waiting on condition [0x0000000000000000]
   java.lang.Thread.State: RUNNABLE

"Surrogate Locker Thread (CMS)" daemon prio=5 tid=0x0000000121000000 nid=0x120d01000 waiting on condition [0x0000000000000000]
   java.lang.Thread.State: RUNNABLE

"Finalizer" daemon prio=8 tid=0x00000001040ef000 nid=0x1208a6000 in Object.wait() [0x00000001208a5000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118)
	- locked <0x000000010a522068> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134)
	at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:159)

"Reference Handler" daemon prio=10 tid=0x00000001040ee000 nid=0x1207a3000 in Object.wait() [0x00000001207a2000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	at java.lang.Object.wait(Object.java:485)
	at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116)
	- locked <0x000000010a51edc0> (a java.lang.ref.Reference$Lock)

"VM Thread" prio=9 tid=0x00000001040e7000 nid=0x1206a0000 runnable 

"Gang worker#0 (Parallel GC Threads)" prio=9 tid=0x0000000104801800 nid=0x101d04000 runnable 

"Gang worker#1 (Parallel GC Threads)" prio=9 tid=0x0000000104000800 nid=0x101e07000 runnable 

"Gang worker#2 (Parallel GC Threads)" prio=9 tid=0x0000000104001000 nid=0x101f0a000 runnable 

"Gang worker#3 (Parallel GC Threads)" prio=9 tid=0x0000000104002000 nid=0x108102000 runnable 

"Concurrent Mark-Sweep GC Thread" prio=9 tid=0x000000010406a000 nid=0x120342000 runnable 
"VM Periodic Task Thread" prio=10 tid=0x000000012100c000 nid=0x121b07000 waiting on condition 

"Exception Catcher Thread" prio=10 tid=0x0000000104801000 nid=0x101c01000 runnable 
JNI global references: 292429

Heap
 par new generation   total 28672K, used 20253K [0x0000000108110000, 0x000000010a110000, 0x000000010a110000)
  eden space 24576K,  80% used [0x0000000108110000, 0x000000010945abe8, 0x0000000109910000)
  from space 4096K,  12% used [0x0000000109d10000, 0x0000000109d8c8c0, 0x000000010a110000)
  to   space 4096K,   0% used [0x0000000109910000, 0x0000000109910000, 0x0000000109d10000)
 concurrent mark-sweep generation total 229376K, used 149399K [0x000000010a110000, 0x0000000118110000, 0x0000000118110000)
 concurrent-mark-sweep perm gen total 77328K, used 46749K [0x0000000118110000, 0x000000011cc94000, 0x000000011d510000)

comment:2 Changed 9 years ago by bwzloranger

  • Owner set to bwzloranger
  • Status changed from new to assigned

comment:3 Changed 9 years ago by bwzloranger

  • Status changed from assigned to closed

comment:4 Changed 9 years ago by jmoore

r7055

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