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Task #2446 (closed)

Opened 9 years ago

Closed 9 years ago

Gatan imported but...

Reported by: jburel Owned by: mlinkert
Priority: major Milestone: OMERO-Beta4.2
Component: Import Version: n.a.
Keywords: n.a. Cc: cxallan
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: 2010-05-27 (10)

Description

Same as other format

javax.xml.transform.TransformerConfigurationException: line 572: Attribute 'Length' outside of element.
	at com.sun.org.apache.xalan.internal.xsltc.trax.TransformerFactoryImpl.passWarningsToListener(TransformerFactoryImpl.java:645)
	at com.sun.org.apache.xalan.internal.xsltc.trax.TransformerFactoryImpl.newTemplates(TransformerFactoryImpl.java:816)
	at loci.common.xml.XMLTools.getStylesheet(XMLTools.java:321)
	at loci.formats.services.OMEXMLServiceImpl.<clinit>(OMEXMLServiceImpl.java:79)
	at java.lang.Class.forName0(Native Method)
	at java.lang.Class.forName(Class.java:164)
	at loci.common.services.ServiceFactory.<init>(ServiceFactory.java:105)
	at loci.common.services.ServiceFactory.<init>(ServiceFactory.java:69)
	at loci.formats.MetadataTools.createOMEXMLService(MetadataTools.java:277)
	at loci.formats.MetadataTools.<clinit>(MetadataTools.java:274)
	at loci.formats.in.GatanReader.initFile(GatanReader.java:195)
	at loci.formats.FormatReader.setId(FormatReader.java:1066)
	at loci.formats.ImageReader.setId(ImageReader.java:644)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:485)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:177)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:485)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:238)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:485)
	at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:240)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:426)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:367)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:215)
	at ome.formats.importer.gui.ImportHandler.access$100(ImportHandler.java:59)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:417)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:269)
	at java.util.concurrent.FutureTask.run(FutureTask.java:123)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:65)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:172)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:651)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:676)

Change History (3)

comment:1 Changed 9 years ago by cxallan

  • Status changed from new to assigned

comment:2 Changed 9 years ago by cxallan

Resolved by the addition of the Xalan dependency and its JARs in r7160 and r7161.

comment:3 Changed 9 years ago by cxallan

  • Status changed from assigned to closed
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