Task #2467 (closed)
Opened 9 years ago
Closed 9 years ago
BUG: OMEModelImpl npe
| Reported by: | wmoore | Owned by: | mlinkert |
|---|---|---|---|
| Priority: | minor | Milestone: | OMERO-Beta4.2 |
| Component: | General | Version: | n.a. |
| Keywords: | n.a. | Cc: | |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | 2010-05-27 (10) |
Description (last modified by wmoore)
Tried opening /fv1000/aryeh/1h.oib with the latest loci_tools jar (r6422) in ImageJ.
java.lang.NullPointerException at ome.xml.r201004.OMEModelImpl.resolveReferences(OMEModelImpl.java:113) at loci.formats.ome.OMEXMLMetadataImpl.resolveReferences(OMEXMLMetadataImpl.java:96) at loci.formats.ome.OMEXMLMetadataImpl.dumpXML(OMEXMLMetadataImpl.java:90) at loci.formats.services.OMEXMLServiceImpl.getOMEXML(OMEXMLServiceImpl.java:279) at loci.plugins.in.DisplayHandler.displayOMEXML(DisplayHandler.java:106) at loci.plugins.in.Importer.run(Importer.java:83) at loci.plugins.LociImporter.run(LociImporter.java:77) at ij.IJ.runUserPlugIn(IJ.java:184) at ij.IJ.runPlugIn(IJ.java:151) at ij.Executer.runCommand(Executer.java:124) at ij.Executer.run(Executer.java:61) at java.lang.Thread.run(Thread.java:613)
Change History (4)
comment:1 Changed 9 years ago by wmoore
- Description modified (diff)
- Summary changed from BUG: Olympus oib to BUG: OMEModelImpl npe
comment:2 Changed 9 years ago by mlinkert
OIB exception should be fixed in bio-formats:r6426.
comment:3 Changed 9 years ago by cxallan
Looking good. Will tested bio-formats:r6450 in ImageJ.
comment:4 Changed 9 years ago by cxallan
- Status changed from new to closed
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Get the same exception opening leica/joel/sequential scan2.lei and zeiss_lsm/martin/sample_files.mdb