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Changes between Initial Version and Version 1 of Ticket #2562


Ignore:
Timestamp:
07/06/10 08:28:41 (14 years ago)
Author:
jmoore
Comment:
wjm:scripts will$ omero -s localhost -u root script replace 109 omero/util_scripts/Combine_Images.py
Using session bdc080ea-576b-490e-8902-224969c08305 (root@localhost). Idle timeout: 10.0 min. Current group: system
Traceback (most recent call last):
  File "/Users/will/Documents/workspace/Omero/dist/bin/omero", line 139, in <module>
    rv = omero.cli.argv()
  File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 1111, in argv
    cli.invoke(args[1:])
  File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 697, in invoke
    stop = self.onecmd(line, previous_args)
  File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 740, in onecmd
    self.execute(line, previous_args)
  File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/cli.py", line 820, in execute
    args.func(args)
  File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/plugins/script.py", line 483, in replace
    client.upload(fpath, ofile=ofile)
  File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero/clients.py", line 620, in upload
    prx.truncate(size) # ticket:2337
  File "/Users/will/Documents/workspace/Omero/dist/lib/python/omero_api_RawFileStore_ice.py", line 103, in truncate
    return _M_omero.api.RawFileStore._op_truncate.invoke(self, ((length, ), _ctx))
omero.InternalException: exception ::omero::InternalException
{
    serverStackTrace = java.nio.channels.NonWritableChannelException
    at sun.nio.ch.FileChannelImpl.truncate(FileChannelImpl.java:328)
    at ome.services.blitz.repo.RepoRawFileStoreI.truncate_async(RepoRawFileStoreI.java:110)
    at omero.api._RawFileStoreDisp.___truncate(_RawFileStoreDisp.java:223)
    at omero.api._RawFileStoreDisp.__dispatch(_RawFileStoreDisp.java:375)
    at IceInternal.Incoming.invoke(Incoming.java:159)
    at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
    at Ice.ConnectionI.message(ConnectionI.java:972)
    at IceInternal.ThreadPool.run(ThreadPool.java:577)
    at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
    at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

    serverExceptionClass = java.nio.channels.NonWritableChannelException
    message = 

Legend:

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  • Ticket #2562

    • Property Status changed from new to assigned
    • Property Priority changed from minor to critical
  • Ticket #2562 – Description

    initial v1  
    22 
    33Issues: 
    4  * files are not being closed properly 
     4 * `Utils.pathToSha1()` leaks file descriptors, leading to `RandomAccessFile` to fail with odd exceptions (see below) 
    55 * `write()` is not implemented. 

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