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Task #3039 (closed)

Opened 9 years ago

Closed 9 years ago

Bio-Rad Raw Error (QA 2870) - 4.2.1 import Testing

Reported by:	omero-qa	Owned by:	bwzloranger
Priority:	minor	Milestone:	OMERO-Beta4.2.1
Component:	from QA	Version:	n.a.
Keywords:	n.a.	Cc:
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	n.a.
Sprint:	2010-10-28 (18)

Description

http://qa.openmicroscopy.org.uk/qa/feedback/2870/

Comment: Results from full import of all images in test_images_good.

References

Referenced by:
← User Story (#3034): 4.2.1 Importing Testing

Change History (7)

comment:1 Changed 9 years ago by bwzloranger

loci.formats.FormatException: Invalid file header : 0
	at loci.formats.in.BioRadReader.initFile(BioRadReader.java:328)
	at loci.formats.FormatReader.setId(FormatReader.java:1074)
	at loci.formats.ImageReader.setId(ImageReader.java:650)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:480)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:244)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:480)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:238)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:480)
	at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:245)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:483)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:433)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:376)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:216)
	at ome.formats.importer.gui.ImportHandler.access$1(ImportHandler.java:149)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:207)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
	at java.lang.Thread.run(Thread.java:637)

comment:2 Changed 9 years ago by bwzloranger

Milestone changed from Unscheduled to OMERO-Beta4.2.1
Sprint set to 2010-09-30 (17)

comment:3 Changed 9 years ago by mlinkert

Should be fixed in bio-formats:r7063.

comment:4 Changed 9 years ago by jburel

Sprint changed from 2010-09-30 (17) to 2010-10-28 (18)

Moved from sprint 2010-09-30 (17)

comment:5 Changed 9 years ago by jburel

Owner changed from cxallan to bwzloranger

comment:6 Changed 9 years ago by jburel

Status changed from new to assigned

comment:7 Changed 9 years ago by bwzloranger

Resolution set to fixed
Status changed from assigned to closed

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