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Task #3120 (closed)

Opened 9 years ago

Closed 9 years ago

BUG:Feedback 2890 SVS OOM

Reported by: omero-qa Owned by: cxallan
Priority: major Milestone: OMERO-Beta4.3
Component: from QA Version: n.a.
Keywords: n.a. Cc: brian.loranger@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

http://qa.openmicroscopy.org.uk/qa/feedback/2890/

Comment: Latest round of testing from 'test_images_good'.

Change History (8)

comment:1 Changed 9 years ago by bwzloranger

  • Milestone changed from Unscheduled to OMERO-Beta4.2.1
  • Priority changed from minor to major
  • Sprint set to 2010-10-28 (18)
Ice.MemoryLimitException
    reason = (null)
	at IceInternal.BasicStream.expand(BasicStream.java:2145)
	at IceInternal.BasicStream.writeByteSeq(BasicStream.java:728)
	at Ice.ByteSeqHelper.write(ByteSeqHelper.java:19)
	at omero.api._RawPixelsStoreDelM.setPlane(_RawPixelsStoreDelM.java:1167)
	at omero.api.RawPixelsStorePrxHelper.setPlane(RawPixelsStorePrxHelper.java:1614)
	at omero.api.RawPixelsStorePrxHelper.setPlane(RawPixelsStorePrxHelper.java:1586)
	at ome.formats.OMEROMetadataStoreClient.setPlane(OMEROMetadataStoreClient.java:2327)
	at ome.formats.importer.ImportLibrary.writeDataPlanarBased(ImportLibrary.java:860)
	at ome.formats.importer.ImportLibrary.importData(ImportLibrary.java:730)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:557)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:433)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:376)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:216)
	at ome.formats.importer.gui.ImportHandler.access$100(ImportHandler.java:59)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:207)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
	at java.lang.Thread.run(Thread.java:637)

comment:2 Changed 9 years ago by bwzloranger

This is a huge >1GB image.. should probably out of TIG and into pending or something till it really can import.

comment:3 Changed 9 years ago by cxallan

Until we get big images done this is not going to be fixed. Moving to the big images import story.

comment:4 Changed 9 years ago by cxallan

  • Milestone OMERO-Beta4.2.1 deleted
  • Sprint 2010-10-28 (18) deleted

comment:5 Changed 9 years ago by bwzloranger

I've moved the image to test_images_onhold for now. It should be moved back to _good when we are ready for big image testing.

comment:6 Changed 9 years ago by jburel

Referencing ticket #2900 has changed sprint.

comment:7 Changed 9 years ago by jburel

  • Milestone set to OMERO-Beta4.3

comment:8 Changed 9 years ago by bwzloranger

  • Resolution set to wontfix
  • Status changed from new to closed

Closed, this bug is related to a big images issue with the SVS file in question (the file is massive 10kX10k when uncompressed), While this file is valid it will never import under current version and has been moved to 'test_images_pending' till big images working

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