Task #3120 (closed)
Opened 9 years ago
Closed 9 years ago
BUG:Feedback 2890 SVS OOM
| Reported by: | omero-qa | Owned by: | cxallan |
|---|---|---|---|
| Priority: | major | Milestone: | OMERO-Beta4.3 |
| Component: | from QA | Version: | n.a. |
| Keywords: | n.a. | Cc: | brian.loranger@… |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/2890/
Comment: Latest round of testing from 'test_images_good'.
Change History (8)
comment:1 Changed 9 years ago by bwzloranger
- Milestone changed from Unscheduled to OMERO-Beta4.2.1
- Priority changed from minor to major
- Sprint set to 2010-10-28 (18)
comment:2 Changed 9 years ago by bwzloranger
This is a huge >1GB image.. should probably out of TIG and into pending or something till it really can import.
comment:3 Changed 9 years ago by cxallan
Until we get big images done this is not going to be fixed. Moving to the big images import story.
comment:4 Changed 9 years ago by cxallan
- Milestone OMERO-Beta4.2.1 deleted
- Sprint 2010-10-28 (18) deleted
comment:5 Changed 9 years ago by bwzloranger
I've moved the image to test_images_onhold for now. It should be moved back to _good when we are ready for big image testing.
comment:6 Changed 9 years ago by jburel
Referencing ticket #2900 has changed sprint.
comment:7 Changed 9 years ago by jburel
- Milestone set to OMERO-Beta4.3
comment:8 Changed 9 years ago by bwzloranger
- Resolution set to wontfix
- Status changed from new to closed
Closed, this bug is related to a big images issue with the SVS file in question (the file is massive 10kX10k when uncompressed), While this file is valid it will never import under current version and has been moved to 'test_images_pending' till big images working
Ice.MemoryLimitException reason = (null) at IceInternal.BasicStream.expand(BasicStream.java:2145) at IceInternal.BasicStream.writeByteSeq(BasicStream.java:728) at Ice.ByteSeqHelper.write(ByteSeqHelper.java:19) at omero.api._RawPixelsStoreDelM.setPlane(_RawPixelsStoreDelM.java:1167) at omero.api.RawPixelsStorePrxHelper.setPlane(RawPixelsStorePrxHelper.java:1614) at omero.api.RawPixelsStorePrxHelper.setPlane(RawPixelsStorePrxHelper.java:1586) at ome.formats.OMEROMetadataStoreClient.setPlane(OMEROMetadataStoreClient.java:2327) at ome.formats.importer.ImportLibrary.writeDataPlanarBased(ImportLibrary.java:860) at ome.formats.importer.ImportLibrary.importData(ImportLibrary.java:730) at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:557) at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:433) at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:376) at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:216) at ome.formats.importer.gui.ImportHandler.access$100(ImportHandler.java:59) at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:207) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:637)