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Task #3256 (new)

Opened 10 years ago

Last modified 6 years ago

importing and viewing nifti, D — at Version 7

Reported by: jburel Owned by:
Priority: critical Milestone: OMERO-Beta4.3
Component: General Version: n.a.
Keywords: n.a. Cc: jamoore, cxallan, wmoore, rleigh
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description (last modified by jburel)

  • Import was successful (nifti/frans/eNlf-02-05-08-rats25-28_v1_rat_25_conf_100.hdr)
  • Image cannot be viewed
  • Dv from OMX. Improve support for images with larger range
omero.InternalException
    serverStackTrace = "ome.conditions.InternalException:  Wrapped Exception: (java.lang.ArrayIndexOutOfBoundsException):
                        32768
                        	at omeis.providers.re.quantum.Quantization_8_16_bit.buildLUT(Quantization_8_16_bit.java:272)
                        	at omeis.providers.re.quantum.Quantization_8_16_bit.onWindowChange(Quantization_8_16_bit.java:283)
                        	at omeis.providers.re.quantum.QuantumStrategy.setWindow(QuantumStrategy.java:322)
                        	at omeis.providers.re.QuantumManager.initStrategies(QuantumManager.java:117)
  • pixels type is float

Change History (7)

comment:1 Changed 10 years ago by jburel

  • Milestone changed from Unscheduled to OMERO-Beta4.2.1

comment:2 Changed 10 years ago by jburel

  • Milestone changed from OMERO-Beta4.2.1 to OMERO-Beta4.2.2

This can probably be added to the "Known issues"

comment:3 Changed 10 years ago by jburel

  • Description modified (diff)

comment:4 Changed 10 years ago by jburel

  • Milestone changed from OMERO-Beta4.2.2 to OMERO-Beta4.3

comment:5 Changed 10 years ago by jburel

  • Milestone changed from OMERO-Beta4.3 to Unscheduled
  • Summary changed from importing nifti to importing and viewing nifti

comment:6 Changed 10 years ago by jburel

  • Milestone changed from Unscheduled to OMERO-Beta4.3

Moving the ticket to 4.3, for testing purpose

comment:7 Changed 10 years ago by jburel

  • Description modified (diff)
  • Summary changed from importing and viewing nifti to importing and viewing nifti, D
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