id,summary,reporter,owner,description,type,status,priority,milestone,component,resolution,keywords,cc,businessvalue 3535,OME-XML/TIFF import/export,jamoore,,"{{{ OME-XML (Josh, Jean-Marie, Chris, Andrew) * Requirements for improving OME-TIFF * Institute in Estonia * Putting 2000 images in one OME-XML * Lots of annotations in comments, long, boolean * (Jason forwarding screening email) * Export a single row / column / well group * Not duplicating XML for each field, _plane_, etc. * Jean-Marie using OME-TIFF to communicate with ImageJ * OME-TIFF ""lite"", ""basic""? * Just for display * Namespaces for annotations, etc. * Export * Where will we export from? (cF. cluster example) * Doing it in the client? * Andrew: Transporting one big TIFF and the client can piece it apart * Chris: exporter has to be modular * Jean-Marie: a danger is there are no clear strategies on namespace * Chris: Delete-like configuration, then choose the images * Josh: Instrument and a single plane? * Jean-Marie & Chris: Wait. * Using Metadata levels? * Josh: something similar in delete and in upcoming chgrp * Metadata levels are currently just 4 options: ALL, PIXELS-ONLY, ROI * Intentation as opposed to implementation * Not as flexible as delete * That flexibility is probably overkill for export * Then technically do the export * TIFF per file * All ZIP'ed * Andrew: Metadata-only files? * OME-TIFFs as the companion file with minimal spec * Pseudo-schema on top of 2010-06 in OME-TIFF (only ) * Lots of coding work * Steps * Delete-style options * Data-layout options (zip, single plane, etc.) * Model: how to split the files. (release before server?) * Andrew: publish but don't release (PREVIEW) * SA best practices * Have to show it in insight/web! * Round-tripping * LSIDs working * Have a graph which was written in the original import (utility of that?) * Full OmeroReader implementation (all 400 methods) * a couple of individuals; reverse of the Store * Timescale: something by mid- to late-January }}}",requirement,new,critical,OMERO-Beta4.3,,,,jburel ajpatterson cxallan mlinkert-x,