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Task #4094 (closed)

Opened 16 years ago

Closed 11 years ago

OMERO download has strange CLASSPATH requirements

Reported by: mlinkert Owned by: mlinkert
Priority: critical Milestone: Unscheduled
Component: Bio-Formats Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description (last modified by mlinkert)

To successfully download from OMERO in ImageJ, one must have either loci_tools.jar or omero-client.jar in the CLASSPATH. Running 'java -jar ij.jar' and then attempting to download from OMERO results in an exception (the ome.client bean fails to load). See http://trac.openmicroscopy.org.uk/omero/browser/tags/omero-3.0-Beta2/components/common/src/ome/system/OmeroContext.java#L317.

The workaround for now is to start ImageJ using 'java -cp ij.jar:plugins/loci_tools.jar ij.ImageJ'.

Change History (2)

comment:1 Changed 13 years ago by jmoore

imported from bio-formats:#283

comment:2 Changed 11 years ago by mlinkert

  • Description modified (diff)
  • Resolution set to wontfix
  • Status changed from new to closed

The "download from OMERO" plugin is no longer the recommended method of connecting to OMERO through ImageJ, so this just isn't worth the trouble to fix.

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