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Task #4153 (closed)

Opened 9 years ago

Closed 7 years ago

Fix multi-line description MetaMorph ND files

Reported by: callan Owned by: mlinkert
Priority: minor Milestone: OMERO-4.4.7
Component: Bio-Formats Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: 2012-11-20 (2)

Description (last modified by mlinkert)

When a MetaMorph? ND file has a multi-line description setId() fails with an exception:

java.lang.StringIndexOutOfBoundsException: String index out of range: -3
	at java.lang.String.substring(String.java:1937)
	at loci.formats.in.MetamorphReader.initFile(MetamorphReader.java:286)
	at loci.formats.FormatReader.setId(FormatReader.java:901)
	at loci.formats.ImageReader.setId(ImageReader.java:588)
	at com.glencoesoftware.importer.queue.UploadReactor.upload(UploadReactor.java:458)
	at com.glencoesoftware.importer.queue.UploadReactor.run(UploadReactor.java:272)

Change History (9)

comment:1 Changed 9 years ago by jmoore

imported from ​bio-formats:#560

comment:2 Changed 7 years ago by mlinkert

  • Description modified (diff)
  • Milestone changed from Unscheduled to OMERO-4.4.2
  • Status changed from assigned to new

This may no longer be valid, but should be checked anyway.

comment:3 Changed 7 years ago by mlinkert

  • Owner changed from callan to mlinkert-x

comment:4 Changed 7 years ago by mlinkert

  • Milestone changed from OMERO-4.4.3 to OMERO-4.5

comment:5 Changed 7 years ago by jmoore

Did you mean this for the next release with FS? That's still named "4.4.x". I'll do the renaming today.

comment:6 Changed 7 years ago by mlinkert

  • Milestone changed from OMERO-4.5 to OMERO-4.4.x

comment:7 Changed 7 years ago by mlinkert

  • Sprint set to 2012-11-20 (2)

comment:9 Changed 7 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed
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