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Task #4464 (closed)

Opened 13 years ago

Closed 13 years ago

populate metadata script

Reported by: jburel Owned by: cxallan
Priority: minor Milestone: OMERO-Beta4.3
Component: Scripting Version: n.a.
Keywords: n.a. Cc: jamoore
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2011-03-24 (8)

Description

Few points noticed:

  • log indicates populate_roi
  • no PlateColumn type, this should be aligned with populate roi.
  • row and column end up being letter and number. This should be number starting from 0.

On a general note, we should have a template for generating table similar to script e.g. in populate_roi ROI and imageId are the first two columns (in "wrong" order), populate_metadata, first and 4th columns

Change History (10)

comment:1 Changed 13 years ago by cxallan

  • Remaining Time set to 0.25
  • Status changed from new to accepted

comment:2 Changed 13 years ago by cxallan

  • Sprint set to 2011-02-24 (6)

comment:3 Changed 13 years ago by Chris Allan <callan@…>

(In [99813ce458a0880dabbf96d3c7dbae860028851c/ome.git] on branch develop) Updated logger name to populate_metadata. (See #4464)

comment:4 Changed 13 years ago by Chris Allan <callan@…>

(In [7f648efc5fbd8e642b86d5d11f9b7b7b71d96e2b/ome.git] on branch develop) Added resolution for Row and Column bulk metadata entries. (See #4464)

The resolution and translation logic is now set up to make generic
assumptions about CSV columns whose headers are 'Row' or 'Column':

  • Set up a LongColumn? rather than a StringColumn?
  • Translate alpha data to numeric
  • Zero offset the storage of any potential numerics

comment:5 Changed 13 years ago by jburel

The plate used for testing has a plate acquisition.

  • Are they planning to add some tabular data at that level too?
  • Should we add the annotation to the plate acquisition?

comment:6 Changed 13 years ago by jburel

  • Sprint changed from 2011-02-24 (6) to 2011-03-10 (7)

Moved from sprint 2011-02-24 (6)

comment:7 Changed 13 years ago by jburel

  • Sprint changed from 2011-03-10 (7) to 2011-03-24 (8)

Moved from sprint 2011-03-10 (7)

comment:8 Changed 13 years ago by cxallan

  • Owner cxallan deleted
  • Status changed from accepted to new

comment:9 Changed 13 years ago by cxallan

  • Owner set to cxallan

comment:10 Changed 13 years ago by cxallan

  • Remaining Time changed from 0.25 to 0
  • Status changed from new to closed
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