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Task #4595 (closed)

Opened 13 years ago

Closed 13 years ago

BUG:Feedback 3621

Reported by:	omero-qa	Owned by:	cxallan
Priority:	minor	Milestone:	OMERO-Beta4.3
Component:	from QA	Version:	n.a.
Keywords:	n.a.	Cc:	harri.jaalinoja@…, bwzloranger, mlinkert
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	n.a.
Sprint:	n.a.

Description

http://qa.openmicroscopy.org.uk/qa/feedback/3621/

Comment: Here's a file that causes problems.

Cheers,
harri

java.lang.NullPointerException
	at loci.formats.ome.OMEXMLMetadataImpl.getPixelsSizeC(OMEXMLMetadataImpl.java:3461)
	at loci.formats.in.OMETiffReader.initFile(OMETiffReader.java:271)
	at loci.formats.FormatReader.setId(FormatReader.java:1058)
	at loci.formats.ImageReader.setId(ImageReader.java:650)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:480)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:244)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:480)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:238)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:480)
	at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:245)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:483)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:433)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:376)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:216)
	at ome.formats.importer.gui.ImportHandler.access$100(ImportHandler.java:59)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source)
	at java.util.concurrent.FutureTask$Sync.innerRun(Unknown Source)
	at java.util.concurrent.FutureTask.run(Unknown Source)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(Unknown Source)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(Unknown Source)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(Unknown Source)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
	at java.lang.Thread.run(Unknown Source)

References

Change History (1)

comment:1 Changed 13 years ago by jburel

Milestone changed from Unscheduled to OMERO-Beta4.3
Resolution set to fixed
Status changed from new to closed

File now imports correctly. Closing

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