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Task #5100 (closed)

Opened 8 years ago

Closed 8 years ago

BUG:Feedback 3700

Reported by:	omero-qa	Owned by:	melissa
Priority:	minor	Milestone:	Unscheduled
Component:	from QA	Version:	n.a.
Keywords:	n.a.	Cc:	dball07@…
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	n.a.
Sprint:	n.a.

Description

http://qa.openmicroscopy.org.uk/qa/feedback/3700/

Comment: I'm trying to import these deltavision files in 4.2.2. According to the Forum, this problem was fixed in 4.2.1, but I can't seem to get it to work.

References

Change History (3)

comment:1 Changed 8 years ago by bwzloranger

java.lang.IllegalArgumentException: -50 must not be null or non-negative.
	at ome.xml.model.primitives.NonNegativeInteger.<init>(NonNegativeInteger.java:41)
	at ome.xml.model.primitives.PositiveInteger.<init>(PositiveInteger.java:39)
	at loci.formats.in.DeltavisionReader.initFileOld(DeltavisionReader.java:684)
	at loci.formats.in.DeltavisionReader.initFile(DeltavisionReader.java:205)
	at loci.formats.FormatReader.setId(FormatReader.java:1067)
	at loci.formats.ImageReader.setId(ImageReader.java:644)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:476)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:240)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:476)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:238)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:476)
	at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:255)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:447)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:384)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:215)
	at ome.formats.importer.gui.ImportHandler.access$100(ImportHandler.java:59)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$101(ScheduledThreadPoolExecutor.java:165)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
	at java.lang.Thread.run(Thread.java:636)

comment:2 Changed 8 years ago by bwzloranger

Email sent to user via the comment system requesting the files. -- Brian

comment:3 Changed 8 years ago by mlinkert

Resolution set to invalid
Status changed from new to closed

The user replied via QA indicating that the exception can no longer be reproduced. I can't reproduce it myself, and in fact it simply cannot occur in 4.2.2 or the latest code in develop. Most likely, an older version (or perhaps a trunk build) of the importer was being used.

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