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Task #5179 (closed)

Opened 13 years ago

Closed 13 years ago

BUG:Uploading file

Reported by: omero-qa Owned by: jburel
Priority: minor Milestone: OMERO-Beta4.3
Component: from QA Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2011-06-16 (14)

Description

​http://qa.openmicroscopy.org.uk/qa/feedback/3723/

java.lang.Exception: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. 
Cannot set the file's id.
	at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:802)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.uploadFile(OMEROGateway.java:3719)
	at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.prepareAnnotationToAdd(OmeroMetadataServiceImpl.java:361)
	at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.saveData(OmeroMetadataServiceImpl.java:997)
	at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationSaver$1.doCall(StructuredAnnotationSaver.java:90)
	at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
	at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
	at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274)
	at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
	at java.lang.Thread.run(Thread.java:680)
Caused by: Ice.ObjectNotExistException
    id.name = "81:14:9f:a5:fe2cf25:12fa03eee5d:-53a8omero.api.RawFileStore"
    id.category = "0150a7ed-d51e-4272-a44c-55ee5b296a7a"
    facet = ""
    operation = "setFileId"
	at IceInternal.Outgoing.invoke(Outgoing.java:147)
	at omero.api._RawFileStoreDelM.setFileId(_RawFileStoreDelM.java:176)
	at omero.api.RawFileStorePrxHelper.setFileId(RawFileStorePrxHelper.java:252)
	at omero.api.RawFileStorePrxHelper.setFileId(RawFileStorePrxHelper.java:224)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.uploadFile(OMEROGateway.java:3701)
	... 10 more

	at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.showErrorDialog(UserNotifierImpl.java:159)
	at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:246)
	at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:218)
	at org.openmicroscopy.shoola.agents.metadata.MetadataLoader.handleException(MetadataLoader.java:154)
	at org.openmicroscopy.shoola.env.data.events.DSCallAdapter.eventFired(DSCallAdapter.java:84)
	at org.openmicroscopy.shoola.env.data.views.BatchCallMonitor$1.run(BatchCallMonitor.java:124)
	at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
	at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:678)
	at java.awt.EventQueue.access$000(EventQueue.java:86)
	at java.awt.EventQueue$1.run(EventQueue.java:639)
	at java.awt.EventQueue$1.run(EventQueue.java:637)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:648)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)

Change History (3)

comment:1 Changed 13 years ago by jburel

  • Milestone changed from Unscheduled to OMERO-Beta4.3


Bug obtained when linking multiple annotation to a dataset and happening using MAc OS X snow leopard (up to date) with either safari or firefox up to date of today)
Code used to link multiple annotations in python was
link = dataset._obj.linkAnnotation(fa)
updateService.saveAndReturnObject(link);
(fa is of tipy file annotationI, it is created using a modified version of matlab example provided on the website). Please ask further details if you investigate the bug and if they are needed.

comment:2 Changed 13 years ago by jburel

  • Remaining Time set to 0.1
  • Sprint set to 2011-06-16 (14)
  • Status changed from new to accepted

Improve upload of file

comment:3 Changed 13 years ago by jburel <j.burel@…>

  • Remaining Time changed from 0.1 to 0
  • Resolution set to fixed
  • Status changed from accepted to closed

(In [de47356aa75dab21d20ccf8b0e5ce801467f6ce2/ome.git] on branch develop) Review upload of file (close #5179)

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