Task #5179 (closed)
Opened 8 years ago
Closed 8 years ago
BUG:Uploading file
| Reported by: | omero-qa | Owned by: | jburel |
|---|---|---|---|
| Priority: | minor | Milestone: | OMERO-Beta4.3 |
| Component: | from QA | Version: | n.a. |
| Keywords: | n.a. | Cc: | |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | 0.0d |
| Sprint: | 2011-06-16 (14) |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/3723/
java.lang.Exception: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data.
Cannot set the file's id.
at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:802)
at org.openmicroscopy.shoola.env.data.OMEROGateway.uploadFile(OMEROGateway.java:3719)
at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.prepareAnnotationToAdd(OmeroMetadataServiceImpl.java:361)
at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.saveData(OmeroMetadataServiceImpl.java:997)
at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationSaver$1.doCall(StructuredAnnotationSaver.java:90)
at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274)
at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
at java.lang.Thread.run(Thread.java:680)
Caused by: Ice.ObjectNotExistException
id.name = "81:14:9f:a5:fe2cf25:12fa03eee5d:-53a8omero.api.RawFileStore"
id.category = "0150a7ed-d51e-4272-a44c-55ee5b296a7a"
facet = ""
operation = "setFileId"
at IceInternal.Outgoing.invoke(Outgoing.java:147)
at omero.api._RawFileStoreDelM.setFileId(_RawFileStoreDelM.java:176)
at omero.api.RawFileStorePrxHelper.setFileId(RawFileStorePrxHelper.java:252)
at omero.api.RawFileStorePrxHelper.setFileId(RawFileStorePrxHelper.java:224)
at org.openmicroscopy.shoola.env.data.OMEROGateway.uploadFile(OMEROGateway.java:3701)
... 10 more
at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.showErrorDialog(UserNotifierImpl.java:159)
at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:246)
at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:218)
at org.openmicroscopy.shoola.agents.metadata.MetadataLoader.handleException(MetadataLoader.java:154)
at org.openmicroscopy.shoola.env.data.events.DSCallAdapter.eventFired(DSCallAdapter.java:84)
at org.openmicroscopy.shoola.env.data.views.BatchCallMonitor$1.run(BatchCallMonitor.java:124)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:678)
at java.awt.EventQueue.access$000(EventQueue.java:86)
at java.awt.EventQueue$1.run(EventQueue.java:639)
at java.awt.EventQueue$1.run(EventQueue.java:637)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:648)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Change History (3)
comment:1 Changed 8 years ago by jburel
- Milestone changed from Unscheduled to OMERO-Beta4.3
comment:2 Changed 8 years ago by jburel
- Remaining Time set to 0.1
- Sprint set to 2011-06-16 (14)
- Status changed from new to accepted
Improve upload of file
comment:3 Changed 8 years ago by jburel <j.burel@…>
- Remaining Time changed from 0.1 to 0
- Resolution set to fixed
- Status changed from accepted to closed
(In [de47356aa75dab21d20ccf8b0e5ce801467f6ce2/ome.git] on branch develop) Review upload of file (close #5179)
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Bug obtained when linking multiple annotation to a dataset and happening using MAc OS X snow leopard (up to date) with either safari or firefox up to date of today)
Code used to link multiple annotations in python was
link = dataset._obj.linkAnnotation(fa)
updateService.saveAndReturnObject(link);
(fa is of tipy file annotationI, it is created using a modified version of matlab example provided on the website). Please ask further details if you investigate the bug and if they are needed.