Task #5370 (closed)
Opened 8 years ago
Closed 8 years ago
BUG: Crash on Attach to many-images
| Reported by: | ajpatterson | Owned by: | jburel |
|---|---|---|---|
| Priority: | major | Milestone: | OMERO-Beta4.3 |
| Component: | General | Version: | n.a. |
| Keywords: | n.a. | Cc: | |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | 0.0d |
| Sprint: | 2011-06-02 (13) |
Description (last modified by ajpatterson)
When you attach a file (in this case a .xlsx) to a number of selected images you get a crash.
Change History (8)
comment:1 Changed 8 years ago by ajpatterson
comment:2 Changed 8 years ago by ajpatterson
Crash is not repeatable.
comment:3 Changed 8 years ago by jburel
- Owner set to jburel
- Sprint set to 2011-06-02 (13)
Need to write a test
comment:4 Changed 8 years ago by jburel
- Remaining Time set to 0.25
comment:5 Changed 8 years ago by jburel
- Status changed from new to accepted
comment:6 Changed 8 years ago by ajpatterson
- Description modified (diff)
comment:7 Changed 8 years ago by ajpatterson
- Summary changed from BUG: Crash on Attach to many-files to BUG: Crash on Attach to many-images
comment:8 Changed 8 years ago by jburel <j.burel@…>
- Remaining Time changed from 0.25 to 0
- Resolution set to fixed
- Status changed from accepted to closed
(In [67add1dfa9b6f891cf0f10c1a4b9aad0f750e7b8/ome.git] on branch develop) Add test for annotation added to several images (close #5370)
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java.lang.Exception: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. Cannot update the object. at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:875) at org.openmicroscopy.shoola.env.data.OMEROGateway.createObject(OMEROGateway.java:2775) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.linkAnnotation(OmeroMetadataServiceImpl.java:470) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.saveData(OmeroMetadataServiceImpl.java:1006) at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationSaver$1.doCall(StructuredAnnotationSaver.java:90) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. Cannot update the object. at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:875) at org.openmicroscopy.shoola.env.data.OMEROGateway.saveAndReturnObject(OMEROGateway.java:2874) at org.openmicroscopy.shoola.env.data.OMEROGateway.createObject(OMEROGateway.java:2772) ... 10 more Caused by: omero.ValidationException serverStackTrace = "ome.conditions.ValidationException: could not insert: [ome.model.annotations.ImageAnnotationLink]; SQL [insert into imageannotationlink (child, creation_id, external_id, group_id, owner_id, permissions, update_id, parent, version, id) values (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)]; constraint [imageannotationlink_parent_key]; nested exception is org.hibernate.exception.ConstraintViolationException: could not insert: [ome.model.annotations.ImageAnnotationLink] at org.springframework.orm.hibernate3.SessionFactoryUtils.convertHibernateAccessException(SessionFactoryUtils.java:637) at org.springframework.orm.hibernate3.HibernateAccessor.convertHibernateAccessException(HibernateAccessor.java:412) at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:117) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:111) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) at $Proxy81.saveAndReturnObject(Unknown Source) at sun.reflect.GeneratedMethodAccessor1342.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:83) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) at $Proxy81.saveAndReturnObject(Unknown Source) at sun.reflect.GeneratedMethodAccessor1704.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) at ome.services.throttling.Callback.run(Callback.java:56) at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136) at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:64) at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:185) at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:365) at IceInternal.Incoming.invoke(Incoming.java:159) at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) at Ice.ConnectionI.message(ConnectionI.java:972) at IceInternal.ThreadPool.run(ThreadPool.java:577) at IceInternal.ThreadPool.access$100(ThreadPool.java:12) at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) " serverExceptionClass = "ome.conditions.ValidationException" message = "could not insert: [ome.model.annotations.ImageAnnotationLink]; SQL [insert into imageannotationlink (child, creation_id, external_id, group_id, owner_id, permissions, update_id, parent, version, id) values (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)]; constraint [imageannotationlink_parent_key]; nested exception is org.hibernate.exception.ConstraintViolationException: could not insert: [ome.model.annotations.ImageAnnotationLink]" at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) at java.lang.reflect.Constructor.newInstance(Constructor.java:513) at java.lang.Class.newInstance0(Class.java:355) at java.lang.Class.newInstance(Class.java:308) at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) at IceInternal.BasicStream.throwException(BasicStream.java:1632) at IceInternal.Outgoing.throwUserException(Outgoing.java:442) at omero.api._IUpdateDelM.saveAndReturnObject(_IUpdateDelM.java:248) at omero.api.IUpdatePrxHelper.saveAndReturnObject(IUpdatePrxHelper.java:322) at omero.api.IUpdatePrxHelper.saveAndReturnObject(IUpdatePrxHelper.java:294) at org.openmicroscopy.shoola.env.data.OMEROGateway.saveAndReturnObject(OMEROGateway.java:2871) ... 11 more at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.showErrorDialog(UserNotifierImpl.java:183) at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:272) at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:242) at org.openmicroscopy.shoola.agents.metadata.MetadataLoader.handleException(MetadataLoader.java:154) at org.openmicroscopy.shoola.env.data.events.DSCallAdapter.eventFired(DSCallAdapter.java:84) at org.openmicroscopy.shoola.env.data.views.BatchCallMonitor$1.run(BatchCallMonitor.java:124) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:678) at java.awt.EventQueue.access$000(EventQueue.java:86) at java.awt.EventQueue$1.run(EventQueue.java:639) at java.awt.EventQueue$1.run(EventQueue.java:637) at java.security.AccessController.doPrivileged(Native Method) at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) at java.awt.EventQueue.dispatchEvent(EventQueue.java:648) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188) at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)