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Task #5387 (closed)

Opened 8 years ago

Closed 8 years ago

Bug: Import failure for trestle

Reported by: saloynton Owned by: jburel
Priority: minor Milestone: OMERO-Beta4.3
Component: General Version: n.a.
Keywords: n.a. Cc: jamoore
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2011-06-02 (13)

Description (last modified by jburel)

Can I just confirm this is a import issue so I can re-assign?

org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. 
Cannot start the Raw pixels store.
	at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:875)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:7629)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.importImage(OMEROGateway.java:6148)
	at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.importCandidates(OmeroImageServiceImpl.java:171)
	at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.importFile(OmeroImageServiceImpl.java:1167)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.importFile(ImagesImporter.java:84)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.access$000(ImagesImporter.java:55)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter$1.doCall(ImagesImporter.java:105)
	at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
	at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
	at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274)
	at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
	at java.lang.Thread.run(Thread.java:680)
Caused by: omero.MissingPyramidException
    serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/Dir-015/15398_pyramid
                        	at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:441)
                        	at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:311)
                        	at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:278)
                        	at sun.reflect.GeneratedMethodAccessor1419.invoke(Unknown Source)

Change History (4)

comment:1 Changed 8 years ago by jburel

  • Description modified (diff)

comment:2 Changed 8 years ago by jburel

  • Cc jmoore added; sloynton removed

comment:3 Changed 8 years ago by jburel

  • Remaining Time set to 0.1
  • Sprint set to 2011-06-02 (13)
  • Status changed from new to accepted

comment:4 Changed 8 years ago by jburel <j.burel@…>

  • Remaining Time changed from 0.1 to 0
  • Resolution set to fixed
  • Status changed from accepted to closed

(In [68db4e8368c5f79e4291b510a49cb6e1cc397b40/ome.git] on branch develop) Handle Missing Pyramid exception thrown when checking if pyramid is required (close #5387)

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