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Task #5672 (closed)

Opened 8 years ago

Closed 8 years ago

Last modified 8 years ago

BUG: lif/freee edge 6.lif

Reported by: dzmacdonald Owned by: bwzloranger
Priority: critical Milestone: OMERO-Beta4.3
Component: General Version: n.a.
Keywords: n.a. Cc: cxallan
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: 2011-06-02 (13)

Description

The file lif/free edge 6.lif, used to import now it does not.

error

java.lang.RuntimeException: loci.formats.FormatException: Could not compress JPEG-2000 data.
	at ome.io.bioformats.BfPyramidPixelBuffer.setTile(BfPyramidPixelBuffer.java:454)
	at ome.services.RawPixelsBean.setTile(RawPixelsBean.java:764)
	at sun.reflect.GeneratedMethodAccessor833.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.EventHandler.invoke(EventHandler.java:150)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:182)
	at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:166)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:111)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at $Proxy77.setTile(Unknown Source)
	at sun.reflect.GeneratedMethodAccessor833.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:83)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at $Proxy77.setTile(Unknown Source)
	at sun.reflect.GeneratedMethodAccessor834.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
	at ome.services.throttling.Callback.run(Callback.java:56)
	at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
	at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136)
	at ome.services.blitz.impl.RawPixelsStoreI.setTile_async(RawPixelsStoreI.java:268)
	at omero.api._RawPixelsStoreTie.setTile_async(_RawPixelsStoreTie.java:309)
	at omero.api._RawPixelsStoreDisp.___setTile(_RawPixelsStoreDisp.java:862)
	at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1321)
	at IceInternal.Incoming.invoke(Incoming.java:159)
	at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
	at Ice.ConnectionI.message(ConnectionI.java:972)
	at IceInternal.ThreadPool.run(ThreadPool.java:577)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)
Caused by: loci.formats.FormatException: Could not compress JPEG-2000 data.
	at loci.formats.codec.JPEG2000Codec.compress(JPEG2000Codec.java:153)
	at loci.formats.tiff.TiffCompression.compress(TiffCompression.java:314)
	at loci.formats.tiff.TiffSaver.writeImage(TiffSaver.java:342)
	at loci.formats.out.TiffWriter.saveBytes(TiffWriter.java:181)
	at ome.io.bioformats.BfPyramidPixelBuffer.setTile(BfPyramidPixelBuffer.java:450)
	... 49 more
Caused by: java.io.IOException: There is not enough space on the disk
	at java.io.FileOutputStream.writeBytes(Native Method)
	at java.io.FileOutputStream.write(Unknown Source)
	at java.io.BufferedOutputStream.flushBuffer(Unknown Source)
	at java.io.BufferedOutputStream.write(Unknown Source)
	at jj2000.j2k.codestream.writer.FileCodestreamWriter.writePacketBody(FileCodestreamWriter.java:328)
	at jj2000.j2k.entropy.encoder.EBCOTRateAllocator.writeLyResCompPos(EBCOTRateAllocator.java:1072)
	at jj2000.j2k.entropy.encoder.EBCOTRateAllocator.buildAndWriteLayers(EBCOTRateAllocator.java:880)
	at jj2000.j2k.entropy.encoder.EBCOTRateAllocator.runAndWrite(EBCOTRateAllocator.java:411)
	at com.sun.media.imageioimpl.plugins.jpeg2000.J2KImageWriter.write(J2KImageWriter.java:388)
	at loci.formats.services.JAIIIOServiceImpl.writeImage(JAIIIOServiceImpl.java:119)
	at loci.formats.codec.JPEG2000Codec.compress(JPEG2000Codec.java:150)
	... 53 more

Change History (2)

comment:1 Changed 8 years ago by bwzloranger

  • Resolution set to invalid
  • Status changed from new to closed

comment:2 Changed 8 years ago by bwzloranger

Out of space error ;-)

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