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Task #5711 (closed)

Opened 13 years ago

Closed 13 years ago

BUG: Can't access images in share

Reported by: atarkowska Owned by: jamoore
Priority: blocker Milestone: OMERO-Beta4.3
Component: General Version: n.a.
Keywords: n.a. Cc: jamoore
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: 2011-06-16 (14)

Description (last modified by jmoore) 

exception ::omero::SecurityViolation
{
    serverStackTrace = ome.conditions.SecurityViolation: Cannot read ome.model.core.Image:Id_3703
	at ome.security.basic.BasicACLVoter.throwLoadViolation(BasicACLVoter.java:112)
	at ome.security.CompositeACLVoter.throwLoadViolation(CompositeACLVoter.java:86)
	at ome.security.ACLEventListener.onPostLoad(ACLEventListener.java:104)
	at org.hibernate.engine.TwoPhaseLoad.initializeEntity(TwoPhaseLoad.java:250)
	at org.hibernate.loader.Loader.initializeEntitiesAndCollections(Loader.java:898)
	at org.hibernate.loader.Loader.doQuery(Loader.java:773)
	at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:270)
	at org.hibernate.loader.Loader.loadEntity(Loader.java:1953)
	at org.hibernate.loader.entity.AbstractEntityLoader.load(AbstractEntityLoader.java:86)
	at org.hibernate.loader.entity.AbstractEntityLoader.load(AbstractEntityLoader.java:76)
	at org.hibernate.persister.entity.AbstractEntityPersister.load(AbstractEntityPersister.java:3270)
	at org.hibernate.event.def.DefaultLoadEventListener.loadFromDatasource(DefaultLoadEventListener.java:496)
	at org.hibernate.event.def.DefaultLoadEventListener.doLoad(DefaultLoadEventListener.java:477)
	at org.hibernate.event.def.DefaultLoadEventListener.load(DefaultLoadEventListener.java:227)
	at org.hibernate.event.def.DefaultLoadEventListener.onLoad(DefaultLoadEventListener.java:147)
	at org.hibernate.impl.SessionImpl.fireLoad(SessionImpl.java:1082)
	at org.hibernate.impl.SessionImpl.immediateLoad(SessionImpl.java:1020)
	at org.hibernate.proxy.AbstractLazyInitializer.initialize(AbstractLazyInitializer.java:176)
	at org.hibernate.Hibernate.initialize(Hibernate.java:428)
	at ome.logic.QueryImpl$1.doInHibernate(QueryImpl.java:174)
	at org.springframework.orm.hibernate3.HibernateTemplate.doExecute(HibernateTemplate.java:406)
	at org.springframework.orm.hibernate3.HibernateTemplate.execute(HibernateTemplate.java:339)
	at ome.logic.QueryImpl.get(QueryImpl.java:157)
	at sun.reflect.GeneratedMethodAccessor1392.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.EventHandler.invoke(EventHandler.java:150)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:111)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:111)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at $Proxy72.get(Unknown Source)
	at sun.reflect.GeneratedMethodAccessor1392.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:83)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at $Proxy72.get(Unknown Source)
	at sun.reflect.GeneratedMethodAccessor1394.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
	at ome.services.throttling.Callback.run(Callback.java:56)
	at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
	at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136)
	at ome.services.blitz.impl.QueryI.get_async(QueryI.java:110)
	at omero.api._IQueryTie.get_async(_IQueryTie.java:127)
	at omero.api._IQueryDisp.___get(_IQueryDisp.java:170)
	at omero.api._IQueryDisp.__dispatch(_IQueryDisp.java:516)
	at IceInternal.Incoming.invoke(Incoming.java:159)
	at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
	at Ice.ConnectionI.message(ConnectionI.java:972)
	at IceInternal.ThreadPool.run(ThreadPool.java:577)
	at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
	at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

    serverExceptionClass = ome.conditions.SecurityViolation
    message = Cannot read ome.model.core.Image:Id_3703
}

Change History (12)

comment:1 Changed 13 years ago by jmoore

  • Cc jmoore added
  • Description modified (diff)
  • Owner changed from jmoore to atarkowska

Ola, are you sure that the share is active? Can you print the event context at this point? The BasicACLVoter below should be a SharingACLVoter if the share is active:

exception ::omero::SecurityViolation
{
    serverStackTrace = ome.conditions.SecurityViolation: Cannot read
ome.model.core.Image:Id_3703
        at
ome.security.basic.BasicACLVoter.throwLoadViolation(BasicACLVoter.java:112)
        at
ome.security.CompositeACLVoter.throwLoadViolation(CompositeACLVoter.java:86)

comment:2 Changed 13 years ago by atarkowska

it seams that share connection context is shareId = -1, but I do not see any changes there. I am wondering if there were any changes on the server side?

comment:3 Changed 13 years ago by atarkowska

I can't reproduce it on my local machine running from today late morning. Windows issue?
Well, that is not exactly true. Local server does the same.

Last edited 13 years ago by atarkowska (previous) (diff)

comment:4 Changed 13 years ago by jmoore

  • Owner changed from atarkowska to jmoore
  • Priority changed from minor to blocker
  • Status changed from new to accepted

Looks like getEventContext() is not preserving the shareid.

comment:5 Changed 13 years ago by jmoore <josh@…>

(In [8219b3b939fb7c5dd651a641585a4e9290b1dce7/ome.git] on branch develop) Failing test of share activation (See #5711)

comment:6 Changed 13 years ago by jmoore <josh@…>

(In [7de21753963fdda24cc3840fb3b0fdf97ba0272a/ome.git] on branch develop) Immediate fix for lost shareId (See #5711)

comment:7 Changed 13 years ago by Aleksandra Tarkowska <aleksandrat@…>

(In [7d5df5debe0b534dfcf68bc2a1039f2555ad957e/ome.git] on branch develop) this clean up getEventContext reload in every single call, see #5711 and remove unexpected print out

comment:8 Changed 13 years ago by jmoore

Also in the process of reducing the calls to IAdmin.getEventContext throughout the rest of the code base:

~/git $ git grep -n -E "[.]getEventContext\(\)"  | grep -vE "(conn|System|System\(\)|self|secSys|sm|sessionManager|client|mgr|factory|manager|basic|sec).getEventContext" | grep -v test
components/blitz/src/ome/formats/OMEROMetadataStoreClient.java:402:        eventContext = iAdmin.getEventContext();
components/blitz/src/ome/services/blitz/gateway/services/impl/DataServiceImpl.java:81:                    ownUserId = gatewayFactory.getAdminService().getEventContext().userId;
components/insight/SRC/org/openmicroscopy/shoola/env/data/OMEROGateway.java:484:			getAdminService().getEventContext();
components/insight/TEST/org/openmicroscopy/shoola/examples/data/Gateway.java:285:			eventContext = getAdminService().getEventContext();
components/server/src/ome/security/SecuritySystemHolder.java:83:        return choose().getEventContext();
components/server/src/ome/services/delete/QueryConstraints.java:55:            p.addLong("owner", iAdmin.getEventContext().getCurrentUserId());
components/server/src/ome/services/sessions/SessionManagerImpl.java:1170:                    sf.getAdminService().getEventContext();
components/tools/OmeroImageJ/Omero_ImageJ/src/ome/ij/data/Gateway.java:367:			EventContext ctx = getAdminService().getEventContext();
components/tools/OmeroPy/src/omero/gateway/__init__.py:1379:        self._ctx = self._proxies['admin'].getEventContext()
components/tools/OmeroPy/src/omero/gateway/__init__.py:1429:            self.c.sf.getAdminService().getEventContext()
components/tools/OmeroPy/src/omero/gateway/__init__.py:1600:            self._ctx = self._proxies['admin'].getEventContext()
components/tools/OmeroPy/src/omero/plugins/sessions.py:311:        ec = sf.getAdminService().getEventContext()
components/tools/OmeroPy/src/omero/plugins/sessions.py:384:                        grp = rv[0].sf.getAdminService().getEventContext().groupName
components/tools/OmeroPy/src/omero/processor.py:358:        gid = client.sf.getAdminService().getEventContext().groupId
components/tools/OmeroPy/src/omero/processor.py:911:        uid = client.sf.getAdminService().getEventContext().userId
components/tools/OmeroWeb/omeroweb/webclient/webclient_gateway.py:196:            self._ctx = self.getAdminService().getEventContext()
examples/OmeroClients/sudo.java:28:            System.out.println( sudoAdminSvc.getEventContext().userName );
examples/OmeroClients/sudo.m:17:    disp(sudoAdmin.Svc.getEventContext().userName);
examples/OmeroClients/sudo.py:20:    print sudoAdminSvc.getEventContext().userName
examples/OmeroClients/timeout.java:17:	System.out.println(s.getAdminService().getEventContext().sessionUuid);
examples/OmeroTables/FindMeasurements.java:69:        final long userId = admin.getEventContext().userId;

comment:9 Changed 13 years ago by jmoore <josh@…>

(In [bd138a37947b11b8b60b31431433a1a44c70d6ff/ome.git] on branch develop) Reduce calls to IAdmin.getEventContext (See #4011, #5711)

comment:10 Changed 13 years ago by jmoore <josh@…>

(In [afe533e910e4e4673555b7cd45d6e44c5309536f/ome.git] on branch develop) Fix setCurrentGroup in OMEROMetadataStoreClient (See #5711)

comment:11 Changed 13 years ago by jburel

  • Sprint changed from 2011-06-02 (13) to 2011-06-16 (14)

Moved from sprint 2011-06-02 (13)

comment:12 Changed 13 years ago by jmoore

  • Resolution set to fixed
  • Status changed from accepted to closed

Much of the work here should have been filed under #5690. This issue can be considered closed.

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